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Difference between revisions of "TSS:Hg 168981.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK223068:0 BC017716:0 ENST00000581864.5:-1 ENST00000580437.5:-15 ENST00000583093.5:-16 AK312980:-17 U77643:-18 ENST00000269389.8:-19 ENST00000582290.5:-19 NM_003004:-19 AK223104:-21 ENST00000582563.5:-22 AK290708:-251 ENST00000581691.5:-327
+
|all_trans=HGNC:10707
 
|chr=chr17
 
|chr=chr17
 
|cpg_percent=0.1
 
|cpg_percent=0.1
Line 22: Line 22:
 
|nearest_refseq=NM_003004
 
|nearest_refseq=NM_003004
 
|nearest_unigene=Hs.558009
 
|nearest_unigene=Hs.558009
|num_trans=14
+
|num_trans=6398
 
|species=human
 
|species=human
 
|start=82333721
 
|start=82333721

Latest revision as of 18:36, 20 July 2021

Basic information about the TSS


TSS ID:hg_168981.1
Species:human
Chr:chr17
TSS Classification:yes
Start:82333721
End:82333747
Strand:-
TSS Score:1
Start of the center position in the TSS region:82333734
End of the center position in the TSS region:82333735



Gene and protein annotation


Transcript_name:AK223068 BC017716
Distance:0
GeneID:6398
HGNC/MGI_ID:HGNC:10707
UniProt_ID:Q53G63
Gene_name:secreted and transmembrane 1
Gene_symbol:SECTM1
Gene_synonyms:K12
Gene_source:HGNC:10707



Transcript annotation


Transcript_name:AK223068 BC017716
Distance:0
Num_trans:6398
All_trans:HGNC:10707



TATA-Box annotation


Distance to TSS:32
Nearest PromoterID:NM_003004
Entrez ID:6398
Nearest Unigene:Hs.558009
Nearest Refseq:NM_003004
Nearest Ensembl:ENSG00000141574
Gene Name:secreted and transmembrane 1
Gene Alias:K12|SECTM
Gene Description:secreted and transmembrane 1
Gene Type:protein-coding
CpG%:0.1
GC%:0.731343
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):