Difference between revisions of "TSS:Hg 49896.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|DOC1= | |DOC1= | ||
| − | |all_trans= | + | |all_trans=HGNC:69 |
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_002940 | |nearest_refseq=NM_002940 | ||
|nearest_unigene=Hs.12013 | |nearest_unigene=Hs.12013 | ||
| − | |num_trans= | + | |num_trans=6059 |
|species=human | |species=human | ||
|start=145098269 | |start=145098269 | ||
|start_of_center_position=145098306 | |start_of_center_position=145098306 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000502586.5 ENST00000502803.5 ENST00000507193.5 ENST00000296577.9 ENST00000506506.5 | + | |transcript_name=ENST00000502586.5 ENST00000502803.5 ENST00000507193.5 ENST00000296577.9 ENST00000506506.5 AK315198 AB062293 X76388 BC016283 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_49896.1 | |tss_id=hg_49896.1 | ||
Latest revision as of 00:36, 22 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 145098306 |
|---|---|
| End of the center position in the TSS region: | 145098307 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000502586.5 ENST00000502803.5 ENST00000507193.5 ENST00000296577.9 ENST00000506506.5 AK315198 AB062293 X76388 BC016283 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6059 |
| All_trans: | HGNC:69 |
TATA-Box annotation
| Distance to TSS: | -5 |
|---|---|
| Nearest PromoterID: | NM_001040876 |
| Entrez ID: | 6059 |
| Nearest Unigene: | Hs.12013 |
| Nearest Refseq: | NM_002940 |
| Nearest Ensembl: | ENSG00000164163 |
| Gene Name: | ATP binding cassette subfamily E member 1 |
| Gene Alias: | ABC38|OABP|RLI|RLI1|RNASEL1|RNASELI|RNS4I |
| Gene Description: | ATP binding cassette subfamily E member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
