Difference between revisions of "TSS:Hg 16784.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC034684:2 |chr=chr1 |cpg_percent=0.035 |distance=2 |distance_to_tss=-3676 |end=203179495 |entrez_id=4608 |gc_percent=0.636816 |gene_alias=- |gene_descr...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:1932 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance=2 | |distance=2 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-3664 |
|end=203179495 | |end=203179495 | ||
| + | |end_of_center_position=203179490 | ||
|entrez_id=4608 | |entrez_id=4608 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| Line 14: | Line 15: | ||
|gene_source=HGNC:1932 | |gene_source=HGNC:1932 | ||
|gene_symbol=CHI3L1 | |gene_symbol=CHI3L1 | ||
| − | |gene_synonyms=GP39 YKL40 | + | |gene_synonyms=GP39 YK-40 YKL40 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:1932 | |hgnc_mgi_id=HGNC:1932 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_004997 | |nearest_refseq=NM_004997 | ||
|nearest_unigene=Hs.927 | |nearest_unigene=Hs.927 | ||
| − | |num_trans= | + | |num_trans=1116 |
|species=human | |species=human | ||
|start=203179484 | |start=203179484 | ||
| + | |start_of_center_position=203179489 | ||
|strand=- | |strand=- | ||
|transcript_name=BC034684 | |transcript_name=BC034684 | ||
Latest revision as of 18:11, 20 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 203179489 |
|---|---|
| End of the center position in the TSS region: | 203179490 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC034684 |
|---|---|
| Distance: | 2 |
| Num_trans: | 1116 |
| All_trans: | HGNC:1932 |
TATA-Box annotation
| Distance to TSS: | -3664 |
|---|---|
| Nearest PromoterID: | NM_004997 |
| Entrez ID: | 4608 |
| Nearest Unigene: | Hs.927 |
| Nearest Refseq: | NM_004997 |
| Nearest Ensembl: | ENSG00000133055 |
| Gene Name: | chitinase 3 like 1 |
| Gene Alias: | - |
| Gene Description: | myosin binding protein H |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
