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Difference between revisions of "TSS:Hg 151905.1"

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{{TSSDetail
 
{{TSSDetail
 
|NM23H4=
 
|NM23H4=
|all_trans=ENST00000433358.5:0 uc059ojz.1:0 BT019438:-4 AB528678:-5 JF432627:-5 KJ905838:-5 KJ905242:-5 Y07604:-15 ENST00000382940.8:-18 ENST00000219479.6:-18 uc059ojy.1:-18 uc002cgz.4:-18 BC004880:-18 ENST00000460297.1:-19 uc059ojx.1:-19 ENST00000444498.5:-27 uc059ojw.1:-27 ENST00000448828.5:-28 uc059ojv.1:-28 ENST00000620944.4:-35 ENST00000621774.4:-35 NM_001286435:-35 NM_001286439:-35 NM_001286438:-35 NM_001286433:-35 NM_005009:-35 uc032dne.2:-35 uc032dnh.2:-35 BC017067:-35 ENST00000454619.5:-458 uc059oju.1:-458 NM_001286436:-472 ENST00000450036.1:500 NM_001286440:500 uc032dni.2:500
+
|all_trans=HGNC:7852
 
|chr=chr16
 
|chr=chr16
 
|cpg_percent=0.165
 
|cpg_percent=0.165
 
|distance=0
 
|distance=0
|distance_to_tss=42
+
|distance_to_tss=35
 
|end=397242
 
|end=397242
 
|end_of_center_position=397235
 
|end_of_center_position=397235
 
|entrez_id=4833
 
|entrez_id=4833
 
|gc_percent=0.840796
 
|gc_percent=0.840796
|gene_alias=NDPK-D
+
|gene_alias=NDPK-D{{!}}NM23H4{{!}}nm23-H4
 
|gene_description=NME/NM23 nucleoside diphosphate kinase 4
 
|gene_description=NME/NM23 nucleoside diphosphate kinase 4
 
|gene_id=4833
 
|gene_id=4833
Line 20: Line 20:
 
|hgnc_mgi_id=HGNC:7852
 
|hgnc_mgi_id=HGNC:7852
 
|nearest_ensembl=ENSG00000103202
 
|nearest_ensembl=ENSG00000103202
|nearest_promoter_id=NM_005009
+
|nearest_promoter_id=NM_001286435
 
|nearest_refseq=NM_005009
 
|nearest_refseq=NM_005009
 
|nearest_unigene=Hs.9235
 
|nearest_unigene=Hs.9235
 
|nm23-H4=
 
|nm23-H4=
|num_trans=35
+
|num_trans=4833
 
|species=human
 
|species=human
 
|start=397226
 
|start=397226
 
|start_of_center_position=397234
 
|start_of_center_position=397234
 
|strand=+
 
|strand=+
|transcript_name=ENST00000433358.5 uc059ojz.1
+
|transcript_name=ENST00000433358.5
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_151905.1
 
|tss_id=hg_151905.1

Latest revision as of 12:22, 20 July 2021

Basic information about the TSS


TSS ID:hg_151905.1
Species:human
Chr:chr16
TSS Classification:yes
Start:397226
End:397242
Strand:+
TSS Score:1
Start of the center position in the TSS region:397234
End of the center position in the TSS region:397235



Gene and protein annotation


Transcript_name:ENST00000433358.5
Distance:0
GeneID:4833
HGNC/MGI_ID:HGNC:7852
UniProt_ID:H0Y6J0
Gene_name:NME/NM23 nucleoside diphosphate kinase 4
Gene_symbol:NME4
Gene_synonyms:NDPKD NM23H4 nm23-H4
Gene_source:HGNC:7852



Transcript annotation


Transcript_name:ENST00000433358.5
Distance:0
Num_trans:4833
All_trans:HGNC:7852



TATA-Box annotation


Distance to TSS:35
Nearest PromoterID:NM_001286435
Entrez ID:4833
Nearest Unigene:Hs.9235
Nearest Refseq:NM_005009
Nearest Ensembl:ENSG00000103202
Gene Name:NME/NM23 nucleoside diphosphate kinase 4
Gene Alias:NDPK-D|NM23H4|nm23-H4
Gene Description:NME/NM23 nucleoside diphosphate kinase 4
Gene Type:protein-coding
CpG%:0.165
GC%:0.840796
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):