Difference between revisions of "TSS:Hg 241882.1"
From referenceTSS
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|TTMA= | |TTMA= | ||
|TTMC= | |TTMC= | ||
| − | |all_trans= | + | |all_trans=HGNC:3721 |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=26 |
|distance_to_tss=83 | |distance_to_tss=83 | ||
| − | |end= | + | |end=35688972 |
|end_of_center_position=35688970 | |end_of_center_position=35688970 | ||
|entrez_id=114801 | |entrez_id=114801 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| − | |gene_alias=KIAA1913 | + | |gene_alias=KIAA1913{{!}}TTMA{{!}}TTMC |
|gene_description=transmembrane protein 200A | |gene_description=transmembrane protein 200A | ||
| − | |gene_id= | + | |gene_id=2289 |
| − | |gene_name= | + | |gene_name=FKBP prolyl isomerase 5 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:3721 |
| − | |gene_symbol= | + | |gene_symbol=FKBP5 |
| − | |gene_synonyms= | + | |gene_synonyms=FKBP51 FKBP54 P54 PPIase Ptg-10 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:3721 |
|nearest_ensembl=ENSG00000164484 | |nearest_ensembl=ENSG00000164484 | ||
|nearest_promoter_id=NM_052913 | |nearest_promoter_id=NM_052913 | ||
|nearest_refseq=NM_052913 | |nearest_refseq=NM_052913 | ||
|nearest_unigene=Hs.591341 | |nearest_unigene=Hs.591341 | ||
| − | |num_trans= | + | |num_trans=2289 |
|species=human | |species=human | ||
| − | |start= | + | |start=35688967 |
|start_of_center_position=35688969 | |start_of_center_position=35688969 | ||
| − | |strand= | + | |strand=- |
| − | |transcript_name= | + | |transcript_name=ENST00000542713.1 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_241882.1 | |tss_id=hg_241882.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q13451 |
}} | }} | ||
Latest revision as of 14:35, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 35688969 |
|---|---|
| End of the center position in the TSS region: | 35688970 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000542713.1 |
|---|---|
| Distance: | 26 |
| Num_trans: | 2289 |
| All_trans: | HGNC:3721 |
TATA-Box annotation
| Distance to TSS: | 83 |
|---|---|
| Nearest PromoterID: | NM_052913 |
| Entrez ID: | 114801 |
| Nearest Unigene: | Hs.591341 |
| Nearest Refseq: | NM_052913 |
| Nearest Ensembl: | ENSG00000164484 |
| Gene Name: | FKBP prolyl isomerase 5 |
| Gene Alias: | KIAA1913|TTMA|TTMC |
| Gene Description: | transmembrane protein 200A |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
