Difference between revisions of "TSS:Hg 236393.1"
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{{TSSDetail | {{TSSDetail | ||
|FP977= | |FP977= | ||
| − | |all_trans= | + | |all_trans=HGNC:30321 |
| − | |chr= | + | |chr=chr17 |
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=7 |
| − | |distance_to_tss= | + | |distance_to_tss=69126 |
| − | |end= | + | |end=17136241 |
|end_of_center_position=17136241 | |end_of_center_position=17136241 | ||
|entrez_id=79726 | |entrez_id=79726 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| − | |gene_alias=CDW12 | + | |gene_alias=CDW12{{!}}FP977{{!}}p90-120 |
|gene_description=WD repeat domain 59 | |gene_description=WD repeat domain 59 | ||
| − | |gene_id= | + | |gene_id=23164 |
| − | |gene_name= | + | |gene_name=myosin phosphatase Rho interacting protein |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:30321 |
| − | |gene_symbol= | + | |gene_symbol=MPRIP |
| − | |gene_synonyms= | + | |gene_synonyms=M-RIP RHOIP3 p116Rip |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:30321 |
|nearest_ensembl=ENSG00000103091 | |nearest_ensembl=ENSG00000103091 | ||
|nearest_promoter_id=NM_030581 | |nearest_promoter_id=NM_030581 | ||
|nearest_refseq=NM_030581 | |nearest_refseq=NM_030581 | ||
|nearest_unigene=Hs.280951 | |nearest_unigene=Hs.280951 | ||
| − | |num_trans= | + | |num_trans=23164 |
|p90-120= | |p90-120= | ||
|species=human | |species=human | ||
| − | |start= | + | |start=17136240 |
|start_of_center_position=17136240 | |start_of_center_position=17136240 | ||
| − | |strand= | + | |strand=+ |
| − | |tata_box= | + | |tata_box=1(AGCCCTAAAAGA,-,0.00) |
| − | |transcript_name= | + | |transcript_name=AK092287 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_236393.1 | |tss_id=hg_236393.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q8N236 |
}} | }} | ||
Latest revision as of 12:36, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 17136240 |
|---|---|
| End of the center position in the TSS region: | 17136241 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK092287 |
|---|---|
| Distance: | 7 |
| Num_trans: | 23164 |
| All_trans: | HGNC:30321 |
TATA-Box annotation
| Distance to TSS: | 69126 |
|---|---|
| Nearest PromoterID: | NM_030581 |
| Entrez ID: | 79726 |
| Nearest Unigene: | Hs.280951 |
| Nearest Refseq: | NM_030581 |
| Nearest Ensembl: | ENSG00000103091 |
| Gene Name: | myosin phosphatase Rho interacting protein |
| Gene Alias: | CDW12|FP977|p90-120 |
| Gene Description: | WD repeat domain 59 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 1(AGCCCTAAAAGA,-,0.00) |
