Difference between revisions of "TSS:Hg 236501.1"
From referenceTSS
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| Line 3: | Line 3: | ||
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=70092 |
| − | |end= | + | |end=30378991 |
|end_of_center_position=30378988 | |end_of_center_position=30378988 | ||
|entrez_id=201164 | |entrez_id=201164 | ||
| Line 12: | Line 12: | ||
|gene_description=phospholipase D family member 6 | |gene_description=phospholipase D family member 6 | ||
|gene_id=23164 | |gene_id=23164 | ||
| − | |gene_name= | + | |gene_name=PLD6 |
|gene_source=HGNC:30321 | |gene_source=HGNC:30321 | ||
|gene_symbol=MPRIP | |gene_symbol=MPRIP | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_178836 | |nearest_refseq=NM_178836 | ||
|nearest_unigene=Hs.729079 | |nearest_unigene=Hs.729079 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=30378984 |
|start_of_center_position=30378987 | |start_of_center_position=30378987 | ||
| − | |strand= | + | |strand=- |
| − | |transcript_name= | + | |transcript_name= |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_236501.1 | |tss_id=hg_236501.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q8N236 | |uniprot_id=Q8N236 | ||
}} | }} | ||
Latest revision as of 10:11, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 30378987 |
|---|---|
| End of the center position in the TSS region: | 30378988 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | AK092287:7 BC075847:51 ENST00000466186.1:97 uc060bux.1:97 |
TATA-Box annotation
| Distance to TSS: | 70092 |
|---|---|
| Nearest PromoterID: | NM_178836 |
| Entrez ID: | 201164 |
| Nearest Unigene: | Hs.729079 |
| Nearest Refseq: | NM_178836 |
| Nearest Ensembl: | ENSG00000179598 |
| Gene Name: | PLD6 |
| Gene Alias: | ZUC |
| Gene Description: | phospholipase D family member 6 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
