Difference between revisions of "TSS:Hg 219255.1"
From referenceTSS
| Line 4: | Line 4: | ||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss=- | + | |distance_to_tss=-785 |
|end=66739948 | |end=66739948 | ||
|end_of_center_position=66739948 | |end_of_center_position=66739948 | ||
|entrez_id=27342 | |entrez_id=27342 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
| − | |gene_alias=RABEX5 | + | |gene_alias=RABEX5{{!}}RAP1{{!}}rabex-5 |
|gene_description=RAB guanine nucleotide exchange factor 1 | |gene_description=RAB guanine nucleotide exchange factor 1 | ||
|gene_id=27342 | |gene_id=27342 | ||
| − | |gene_name= | + | |gene_name=RABGEF1 |
|gene_source=HGNC:17676 | |gene_source=HGNC:17676 | ||
|gene_symbol=RABGEF1 | |gene_symbol=RABGEF1 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:17676 | |hgnc_mgi_id=HGNC:17676 | ||
|nearest_ensembl=ENSG00000154710 | |nearest_ensembl=ENSG00000154710 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001367744 |
|nearest_refseq=NM_014504 | |nearest_refseq=NM_014504 | ||
|nearest_unigene=Hs.530053 | |nearest_unigene=Hs.530053 | ||
| − | |num_trans= | + | |num_trans=0 |
|rabex-5= | |rabex-5= | ||
|species=human | |species=human | ||
| Line 29: | Line 29: | ||
|start_of_center_position=66739947 | |start_of_center_position=66739947 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_219255.1 | |tss_id=hg_219255.1 | ||
Latest revision as of 08:11, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 66739947 |
|---|---|
| End of the center position in the TSS region: | 66739948 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000437078.6:27 uc064eam.1:27 |
TATA-Box annotation
| Distance to TSS: | -785 |
|---|---|
| Nearest PromoterID: | NM_001367744 |
| Entrez ID: | 27342 |
| Nearest Unigene: | Hs.530053 |
| Nearest Refseq: | NM_014504 |
| Nearest Ensembl: | ENSG00000154710 |
| Gene Name: | RABGEF1 |
| Gene Alias: | RABEX5|RAP1|rabex-5 |
| Gene Description: | RAB guanine nucleotide exchange factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
