Difference between revisions of "TSS:Hg 242511.1"
From referenceTSS
(One intermediate revision by the same user not shown) | |||
Line 3: | Line 3: | ||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
− | |distance= | + | |distance=NA |
|distance_to_tss=145 | |distance_to_tss=145 | ||
− | |end= | + | |end=90403493 |
|end_of_center_position=90403489 | |end_of_center_position=90403489 | ||
|entrez_id=2115 | |entrez_id=2115 | ||
Line 12: | Line 12: | ||
|gene_description=ETS variant 1 | |gene_description=ETS variant 1 | ||
|gene_id=2115 | |gene_id=2115 | ||
− | |gene_name= | + | |gene_name=ETV1 |
|gene_source=HGNC:3490 | |gene_source=HGNC:3490 | ||
|gene_symbol=ETV1 | |gene_symbol=ETV1 | ||
Line 22: | Line 22: | ||
|nearest_refseq=NM_004956 | |nearest_refseq=NM_004956 | ||
|nearest_unigene=Hs.22634 | |nearest_unigene=Hs.22634 | ||
− | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
− | |start= | + | |start=90403484 |
|start_of_center_position=90403488 | |start_of_center_position=90403488 | ||
|strand=- | |strand=- | ||
− | |transcript_name= | + | |transcript_name= |
− | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_242511.1 | |tss_id=hg_242511.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=P50549 | |uniprot_id=P50549 | ||
}} | }} |
Latest revision as of 12:29, 14 July 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 90403488 |
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End of the center position in the TSS region: | 90403489 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | |
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Distance: | NA |
Num_trans: | 0 |
All_trans: | NM_001163149:-145 ENST00000403685.5:-154 uc064bqf.1:-154 X87175:-154 ENST00000431887.5:-289 uc064bqo.1:-289 ENST00000242066.9:-330 ENST00000421381.5:-330 NM_001163148:-330 uc064bqa.1:-330 uc064bqn.1:-330 NR_120445:393 ENST00000443137.5:405 uc064bqe.1:405 BC045776:405 AK294755:458 |
TATA-Box annotation
Distance to TSS: | 145 |
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Nearest PromoterID: | NM_001163149 |
Entrez ID: | 2115 |
Nearest Unigene: | Hs.22634 |
Nearest Refseq: | NM_004956 |
Nearest Ensembl: | ENSG00000006468 |
Gene Name: | ETV1 |
Gene Alias: | ER81 |
Gene Description: | ETS variant 1 |
Gene Type: | protein-coding |
CpG%: | 0.055 |
GC%: | 0.472637 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |