Difference between revisions of "TSS:Hg 242562.1"
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{{TSSDetail | {{TSSDetail | ||
|TIG2= | |TIG2= | ||
| + | |all_trans=NM_001005276:-101 KJ894837:-101 ENST00000316368.2:-125 BC137375:-125 BC137376:-125 | ||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=-101 |
| − | |distance_to_tss= | + | |distance_to_tss=1464 |
| − | |end= | + | |end=99876932 |
|end_of_center_position=99876932 | |end_of_center_position=99876932 | ||
|entrez_id=5919 | |entrez_id=5919 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=HP10433 | + | |gene_alias=HP10433{{!}}TIG2 |
|gene_description=retinoic acid receptor responder 2 | |gene_description=retinoic acid receptor responder 2 | ||
| − | |gene_name= | + | |gene_id=81392 |
| + | |gene_name=olfactory receptor family 2 subfamily AE member 1 | ||
| + | |gene_source=HGNC:15087 | ||
| + | |gene_symbol=OR2AE1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:15087 | ||
|nearest_ensembl=ENSG00000106538 | |nearest_ensembl=ENSG00000106538 | ||
|nearest_promoter_id=NM_002889 | |nearest_promoter_id=NM_002889 | ||
|nearest_refseq=NM_002889 | |nearest_refseq=NM_002889 | ||
|nearest_unigene=Hs.647064 | |nearest_unigene=Hs.647064 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
| − | |start= | + | |start=99876931 |
|start_of_center_position=99876931 | |start_of_center_position=99876931 | ||
| − | |strand= | + | |strand=- |
| − | |transcript_name= | + | |transcript_name=NM_001005276.1 KJ894837 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_242562.1 | |tss_id=hg_242562.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=Q8NHA4 | ||
}} | }} | ||
Latest revision as of 14:50, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 99876931 |
|---|---|
| End of the center position in the TSS region: | 99876932 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001005276.1 KJ894837 |
|---|---|
| Distance: | -101 |
| Num_trans: | 5 |
| All_trans: | NM_001005276:-101 KJ894837:-101 ENST00000316368.2:-125 BC137375:-125 BC137376:-125 |
TATA-Box annotation
| Distance to TSS: | 1464 |
|---|---|
| Nearest PromoterID: | NM_002889 |
| Entrez ID: | 5919 |
| Nearest Unigene: | Hs.647064 |
| Nearest Refseq: | NM_002889 |
| Nearest Ensembl: | ENSG00000106538 |
| Gene Name: | olfactory receptor family 2 subfamily AE member 1 |
| Gene Alias: | HP10433|TIG2 |
| Gene Description: | retinoic acid receptor responder 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
