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Difference between revisions of "TSS:Hg 100941.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000651121.1:0 ENST00000652156.1:0 ENST00000377024.8:-2 BC036255:-2 BC044620:9 BC053956:9 ENST00000673779.1:-10 ENST00000651200.2:-10 NM_001128618:-10 NM_001371610:-10 ENST00000652752.1:-11
+
|all_trans=HGNC:27037
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 22: Line 22:
 
|nearest_refseq=NM_001128618
 
|nearest_refseq=NM_001128618
 
|nearest_unigene=Hs.371235
 
|nearest_unigene=Hs.371235
|num_trans=11
+
|num_trans=138240
 
|species=human
 
|species=human
 
|start=72060591
 
|start=72060591

Latest revision as of 17:54, 19 July 2021

Basic information about the TSS


TSS ID:hg_100941.1
Species:human
Chr:chr9
TSS Classification:yes
Start:72060591
End:72060603
Strand:-
TSS Score:1
Start of the center position in the TSS region:72060597
End of the center position in the TSS region:72060598



Gene and protein annotation


Transcript_name:ENST00000651121.1 ENST00000652156.1
Distance:0
GeneID:138240
HGNC/MGI_ID:HGNC:27037
UniProt_ID:A0A494C0F4 A0A494C1R2
Gene_name:chromosome 9 open reading frame 57
Gene_symbol:C9orf57
Gene_synonyms:
Gene_source:HGNC:27037



Transcript annotation


Transcript_name:ENST00000651121.1 ENST00000652156.1
Distance:0
Num_trans:138240
All_trans:HGNC:27037



TATA-Box annotation


Distance to TSS:8
Nearest PromoterID:NM_001128618
Entrez ID:138240
Nearest Unigene:Hs.371235
Nearest Refseq:NM_001128618
Nearest Ensembl:ENSG00000204669
Gene Name:chromosome 9 open reading frame 57
Gene Alias:-
Gene Description:chromosome 9 open reading frame 57
Gene Type:protein-coding
CpG%:0.02
GC%:0.353234
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):