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Difference between revisions of "TSS:Hg 100358.1"

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Line 4: Line 4:
 
|FTDALS=
 
|FTDALS=
 
|FTDALS1=
 
|FTDALS1=
|all_trans=ENST00000488117.5:0 AL832229:0 AL832467:0 ENST00000644136.1:-4 ENST00000380003.8:-28 NM_018325:-28 AK291425:-30 ENST00000673600.1:-41 ENST00000379995.1:-302 ENST00000647196.1:-366 JN681271:-391 AK057806:-391 ENST00000619707.5:-413 ENST00000379997.7:-413 NM_001256054:-413 NM_145005:-413
+
|all_trans=HGNC:28337
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.13
 
|cpg_percent=0.13
Line 26: Line 26:
 
|nearest_refseq=NM_018325
 
|nearest_refseq=NM_018325
 
|nearest_unigene=Hs.493639
 
|nearest_unigene=Hs.493639
|num_trans=16
+
|num_trans=203228
 
|species=human
 
|species=human
 
|start=27573394
 
|start=27573394

Latest revision as of 17:41, 19 July 2021

Basic information about the TSS


TSS ID:hg_100358.1
Species:human
Chr:chr9
TSS Classification:yes
Start:27573394
End:27573453
Strand:-
TSS Score:1
Start of the center position in the TSS region:27573423
End of the center position in the TSS region:27573424



Gene and protein annotation


Transcript_name:ENST00000488117.5 AL832229 AL832467
Distance:0
GeneID:203228
HGNC/MGI_ID:HGNC:28337
UniProt_ID:
Gene_name:C9orf72-SMCR8 complex subunit
Gene_symbol:C9orf72
Gene_synonyms:DENND9 DENNL72 MGC23980
Gene_source:HGNC:28337



Transcript annotation


Transcript_name:ENST00000488117.5 AL832229 AL832467
Distance:0
Num_trans:203228
All_trans:HGNC:28337



TATA-Box annotation


Distance to TSS:57
Nearest PromoterID:NM_018325
Entrez ID:203228
Nearest Unigene:Hs.493639
Nearest Refseq:NM_018325
Nearest Ensembl:ENSG00000147894
Gene Name:C9orf72-SMCR8 complex subunit
Gene Alias:ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1
Gene Description:C9orf72-SMCR8 complex subunit
Gene Type:protein-coding
CpG%:0.13
GC%:0.751244
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):