Difference between revisions of "TSS:Hg 100409.1"
From referenceTSS
| Line 12: | Line 12: | ||
|HSPF4= | |HSPF4= | ||
|NEDD7= | |NEDD7= | ||
| − | |all_trans= | + | |all_trans=HGNC:15984 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| Line 35: | Line 35: | ||
|nearest_refseq=NM_017692 | |nearest_refseq=NM_017692 | ||
|nearest_unigene=Hs.20158 | |nearest_unigene=Hs.20158 | ||
| − | |num_trans= | + | |num_trans=54840 |
|species=human | |species=human | ||
|start=33025088 | |start=33025088 | ||
|start_of_center_position=33025117 | |start_of_center_position=33025117 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000436040.7 ENST00000673487.1 ENST00000460940.6 ENST00000495360.6 ENST00000473270.1 | + | |transcript_name=ENST00000436040.7 ENST00000673487.1 ENST00000460940.6 ENST00000495360.6 ENST00000473270.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100409.1 | |tss_id=hg_100409.1 | ||
Latest revision as of 17:42, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 33025117 |
|---|---|
| End of the center position in the TSS region: | 33025118 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000436040.7 ENST00000673487.1 ENST00000460940.6 ENST00000495360.6 ENST00000473270.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 54840 |
| All_trans: | HGNC:15984 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_001368999 |
| Entrez ID: | 54840 |
| Nearest Unigene: | Hs.20158 |
| Nearest Refseq: | NM_017692 |
| Nearest Ensembl: | ENSG00000137074 |
| Gene Name: | aprataxin |
| Gene Alias: | AOA|AOA1|AXA1|EAOH|EOAHA|FHA-HIT |
| Gene Description: | aprataxin |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
