Difference between revisions of "TSS:Hg 100508.1"
From referenceTSS
| Line 2: | Line 2: | ||
|NYD-SP22= | |NYD-SP22= | ||
|SMRP1= | |SMRP1= | ||
| − | |all_trans= | + | |all_trans=HGNC:19919 |
|bA573M23.4= | |bA573M23.4= | ||
|chr=chr9 | |chr=chr9 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_032596 | |nearest_refseq=NM_032596 | ||
|nearest_unigene=Hs.50334 | |nearest_unigene=Hs.50334 | ||
| − | |num_trans= | + | |num_trans=84688 |
|species=human | |species=human | ||
|start=34381540 | |start=34381540 | ||
| Line 31: | Line 31: | ||
|strand=- | |strand=- | ||
|tata_box=66(ACCCCTAAAAGG,-,0.00) | |tata_box=66(ACCCCTAAAAGG,-,0.00) | ||
| − | |transcript_name=ENST00000379127.1 ENST00000379133.7 | + | |transcript_name=ENST00000379127.1 ENST00000379133.7 AK094751 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100508.1 | |tss_id=hg_100508.1 | ||
Latest revision as of 17:44, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 34381572 |
|---|---|
| End of the center position in the TSS region: | 34381573 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000379127.1 ENST00000379133.7 AK094751 |
|---|---|
| Distance: | 0 |
| Num_trans: | 84688 |
| All_trans: | HGNC:19919 |
TATA-Box annotation
| Distance to TSS: | 17 |
|---|---|
| Nearest PromoterID: | NM_001252195 |
| Entrez ID: | 84688 |
| Nearest Unigene: | Hs.50334 |
| Nearest Refseq: | NM_032596 |
| Nearest Ensembl: | ENSG00000164972 |
| Gene Name: | chromosome 9 open reading frame 24 |
| Gene Alias: | CBE1|NYD-SP22|SMRP1|bA573M23.4 |
| Gene Description: | chromosome 9 open reading frame 24 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 66(ACCCCTAAAAGG,-,0.00) |
