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Difference between revisions of "TSS:Hg 102027.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000374304.1:-62 BC040897:-62
+
|all_trans=HGNC:23369
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.075
 
|cpg_percent=0.075
Line 22: Line 22:
 
|nearest_refseq=NM_001015882
 
|nearest_refseq=NM_001015882
 
|nearest_unigene=Hs.534196
 
|nearest_unigene=Hs.534196
|num_trans=2
+
|num_trans=652972
 
|species=human
 
|species=human
 
|start=111631216
 
|start=111631216

Latest revision as of 18:18, 19 July 2021

Basic information about the TSS


TSS ID:hg_102027.1
Species:human
Chr:chr9
TSS Classification:yes
Start:111631216
End:111631227
Strand:-
TSS Score:1
Start of the center position in the TSS region:111631221
End of the center position in the TSS region:111631222



Gene and protein annotation


Transcript_name:ENST00000374304.1 BC040897
Distance:-62
GeneID:652972
HGNC/MGI_ID:HGNC:23369
UniProt_ID:
Gene_name:leucine rich repeat containing 37 member A5, pseudogene
Gene_symbol:LRRC37A5P
Gene_synonyms:
Gene_source:HGNC:23369



Transcript annotation


Transcript_name:ENST00000374304.1 BC040897
Distance:-62
Num_trans:652972
All_trans:HGNC:23369



TATA-Box annotation


Distance to TSS:-112
Nearest PromoterID:NM_001015882
Entrez ID:548645
Nearest Unigene:Hs.534196
Nearest Refseq:NM_001015882
Nearest Ensembl:ENSG00000059769
Gene Name:leucine rich repeat containing 37 member A5, pseudogene
Gene Alias:bA16L21.2.1
Gene Description:DnaJ heat shock protein family (Hsp40) member C25
Gene Type:protein-coding
CpG%:0.075
GC%:0.631841
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):