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Difference between revisions of "TSS:Hg 102051.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000355396.7:16 AK056704:16 AY358746:-54 ENST00000374264.6:-56 BC060770:-56 ENST00000374270.8:-86 ENST00000374263.7:-86 NM_001282640:-86 NM_001282643:-86 NM_022486:-86 AK292868:-86
+
|all_trans=HGNC:25413
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.14
 
|cpg_percent=0.14
Line 22: Line 22:
 
|nearest_refseq=NM_022486
 
|nearest_refseq=NM_022486
 
|nearest_unigene=Hs.494827
 
|nearest_unigene=Hs.494827
|num_trans=11
+
|num_trans=64420
 
|species=human
 
|species=human
 
|start=112175200
 
|start=112175200

Latest revision as of 18:18, 19 July 2021

Basic information about the TSS


TSS ID:hg_102051.1
Species:human
Chr:chr9
TSS Classification:yes
Start:112175200
End:112175211
Strand:-
TSS Score:1
Start of the center position in the TSS region:112175205
End of the center position in the TSS region:112175206



Gene and protein annotation


Transcript_name:ENST00000355396.7 AK056704
Distance:16
GeneID:64420
HGNC/MGI_ID:HGNC:25413
UniProt_ID:H3BLV4
Gene_name:sushi domain containing 1
Gene_symbol:SUSD1
Gene_synonyms:DKFZP761E1824
Gene_source:HGNC:25413



Transcript annotation


Transcript_name:ENST00000355396.7 AK056704
Distance:16
Num_trans:64420
All_trans:HGNC:25413



TATA-Box annotation


Distance to TSS:91
Nearest PromoterID:NM_001282640
Entrez ID:64420
Nearest Unigene:Hs.494827
Nearest Refseq:NM_022486
Nearest Ensembl:ENSG00000106868
Gene Name:sushi domain containing 1
Gene Alias:-
Gene Description:sushi domain containing 1
Gene Type:protein-coding
CpG%:0.14
GC%:0.800995
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):