Difference between revisions of "TSS:Hg 102329.1"
From referenceTSS
| Line 4: | Line 4: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| − | |distance=- | + | |distance=-11 |
|distance_to_tss=45 | |distance_to_tss=45 | ||
|end=120929160 | |end=120929160 | ||
| Line 28: | Line 28: | ||
|start_of_center_position=120929127 | |start_of_center_position=120929127 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_001190945.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102329.1 | |tss_id=hg_102329.1 | ||
Latest revision as of 18:24, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 120929127 |
|---|---|
| End of the center position in the TSS region: | 120929128 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001190945.2 |
|---|---|
| Distance: | -11 |
| Num_trans: | 4 |
| All_trans: | ENST00000540010.1:-13 NM_001190945:-13 AK315476:-41 AL832989:327 |
TATA-Box annotation
| Distance to TSS: | 45 |
|---|---|
| Nearest PromoterID: | NM_001190945 |
| Entrez ID: | 7185 |
| Nearest Unigene: | Hs.531251 |
| Nearest Refseq: | NM_005658 |
| Nearest Ensembl: | ENSG00000056558 |
| Gene Name: | TNF receptor associated factor 1 |
| Gene Alias: | EBI6|MGC:10353 |
| Gene Description: | TNF receptor associated factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
