Difference between revisions of "TSS:Hg 103101.1"
From referenceTSS
| Line 3: | Line 3: | ||
|SPATA27= | |SPATA27= | ||
|TEB2= | |TEB2= | ||
| − | |all_trans= | + | |all_trans=HGNC:27845 |
|bA100C15.3= | |bA100C15.3= | ||
|bHLHe80= | |bHLHe80= | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_001012415 | |nearest_refseq=NM_001012415 | ||
|nearest_unigene=Hs.120464 | |nearest_unigene=Hs.120464 | ||
| − | |num_trans= | + | |num_trans=402381 |
|species=human | |species=human | ||
|start=135699473 | |start=135699473 | ||
|start_of_center_position=135699483 | |start_of_center_position=135699483 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000425225.2 | + | |transcript_name=ENST00000425225.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103101.1 | |tss_id=hg_103101.1 | ||
Latest revision as of 18:41, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 135699483 |
|---|---|
| End of the center position in the TSS region: | 135699484 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000425225.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 402381 |
| All_trans: | HGNC:27845 |
TATA-Box annotation
| Distance to TSS: | -3 |
|---|---|
| Nearest PromoterID: | NM_001012415 |
| Entrez ID: | 402381 |
| Nearest Unigene: | Hs.120464 |
| Nearest Refseq: | NM_001012415 |
| Nearest Ensembl: | ENSG00000165643 |
| Gene Name: | spermatogenesis and oogenesis specific basic helix-loop-helix 1 |
| Gene Alias: | C9orf157|NOHLH|ODG5|SPATA27|SPGF32|TEB2|bA100C15.3|bHLHe80 |
| Gene Description: | spermatogenesis and oogenesis specific basic helix-loop-helix 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
