Personal tools

Difference between revisions of "TSS:Hg 103281.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000494046.5:0 AF178941:0 AK308738:0 ENST00000464876.5:2 BC090860:2 BC064542:4 ENST00000492260.5:9 BC029282:9 ENST00000341511.11:-31 NM_001606:-31 AF327657:34 AB384556:36 ENST00000265662.9:-82 ENST00000371605.7:-82
+
|all_trans=HGNC:32
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.17
 
|cpg_percent=0.17
Line 22: Line 22:
 
|nearest_refseq=NM_001606
 
|nearest_refseq=NM_001606
 
|nearest_unigene=Hs.421202
 
|nearest_unigene=Hs.421202
|num_trans=14
+
|num_trans=20
 
|species=human
 
|species=human
 
|start=137028179
 
|start=137028179

Latest revision as of 18:45, 19 July 2021

Basic information about the TSS


TSS ID:hg_103281.1
Species:human
Chr:chr9
TSS Classification:yes
Start:137028179
End:137028206
Strand:-
TSS Score:1
Start of the center position in the TSS region:137028192
End of the center position in the TSS region:137028193



Gene and protein annotation


Transcript_name:ENST00000494046.5 AF178941 AK308738
Distance:0
GeneID:20
HGNC/MGI_ID:HGNC:32
UniProt_ID:
Gene_name:ATP binding cassette subfamily A member 2
Gene_symbol:ABCA2
Gene_synonyms:
Gene_source:HGNC:32



Transcript annotation


Transcript_name:ENST00000494046.5 AF178941 AK308738
Distance:0
Num_trans:20
All_trans:HGNC:32



TATA-Box annotation


Distance to TSS:44
Nearest PromoterID:NM_001606
Entrez ID:20
Nearest Unigene:Hs.421202
Nearest Refseq:NM_001606
Nearest Ensembl:ENSG00000107331
Gene Name:ATP binding cassette subfamily A member 2
Gene Alias:ABC2
Gene Description:ATP binding cassette subfamily A member 2
Gene Type:protein-coding
CpG%:0.17
GC%:0.81592
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):