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Difference between revisions of "TSS:Hg 104053.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|HEL113=
 
|HEL113=
|all_trans=ENST00000478746.1:-35 BC066956:-79 LF211788:-256 MA447365:-256 ENST00000497849.1:258 LQ740465:-291 ENST00000544301.7:-309 NM_003380:-309 LF205547:309 MA441124:309
+
|all_trans=HGNC:12692
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.09
 
|cpg_percent=0.09
Line 23: Line 23:
 
|nearest_refseq=NM_003380
 
|nearest_refseq=NM_003380
 
|nearest_unigene=Hs.455493
 
|nearest_unigene=Hs.455493
|num_trans=10
+
|num_trans=7431
 
|species=human
 
|species=human
 
|start=17228549
 
|start=17228549

Latest revision as of 19:01, 19 July 2021

Basic information about the TSS


TSS ID:hg_104053.1
Species:human
Chr:chr10
TSS Classification:yes
Start:17228549
End:17228611
Strand:+
TSS Score:1
Start of the center position in the TSS region:17228580
End of the center position in the TSS region:17228581



Gene and protein annotation


Transcript_name:ENST00000478746.1
Distance:-35
GeneID:7431
HGNC/MGI_ID:HGNC:12692
UniProt_ID:A0A1B0GTT5
Gene_name:vimentin
Gene_symbol:VIM
Gene_synonyms:
Gene_source:HGNC:12692



Transcript annotation


Transcript_name:ENST00000478746.1
Distance:-35
Num_trans:7431
All_trans:HGNC:12692



TATA-Box annotation


Distance to TSS:339
Nearest PromoterID:NM_003380
Entrez ID:7431
Nearest Unigene:Hs.455493
Nearest Refseq:NM_003380
Nearest Ensembl:ENSG00000026025
Gene Name:vimentin
Gene Alias:-
Gene Description:vimentin
Gene Type:protein-coding
CpG%:0.09
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):