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Difference between revisions of "TSS:Hg 10413.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC016048:119 ENST00000376085.4:-203 NM_001010847:-203 LP895739:-248
+
|all_trans=HGNC:27005
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.1
 
|cpg_percent=0.1
Line 22: Line 22:
 
|nearest_refseq=NM_001010847
 
|nearest_refseq=NM_001010847
 
|nearest_unigene=Hs.657356
 
|nearest_unigene=Hs.657356
|num_trans=4
+
|num_trans=126755
 
|species=human
 
|species=human
 
|start=13513781
 
|start=13513781

Latest revision as of 19:03, 19 July 2021

Basic information about the TSS


TSS ID:hg_10413.1
Species:human
Chr:chr1
TSS Classification:yes
Start:13513781
End:13513800
Strand:-
TSS Score:1
Start of the center position in the TSS region:13513790
End of the center position in the TSS region:13513791



Gene and protein annotation


Transcript_name:BC016048
Distance:119
GeneID:126755
HGNC/MGI_ID:HGNC:27005
UniProt_ID:
Gene_name:leucine rich repeat containing 38
Gene_symbol:LRRC38
Gene_synonyms:
Gene_source:HGNC:27005



Transcript annotation


Transcript_name:BC016048
Distance:119
Num_trans:126755
All_trans:HGNC:27005



TATA-Box annotation


Distance to TSS:212
Nearest PromoterID:NM_001010847
Entrez ID:126755
Nearest Unigene:Hs.657356
Nearest Refseq:NM_001010847
Nearest Ensembl:ENSG00000162494
Gene Name:leucine rich repeat containing 38
Gene Alias:-
Gene Description:leucine rich repeat containing 38
Gene Type:protein-coding
CpG%:0.1
GC%:0.716418
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):