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Difference between revisions of "TSS:Hg 104130.1"

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Line 2: Line 2:
 
|CAVB2=
 
|CAVB2=
 
|MYSB=
 
|MYSB=
|all_trans=ENST00000498816.1:-30 ENST00000377329.10:-38 NM_201590:-38 AK310943:-62 ENST00000612743.1:136 AY675092:140 ENST00000612134.4:141 AY393863:141 AF285239:141 AY393859:141 AY393862:141
+
|all_trans=HGNC:1402
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 24: Line 24:
 
|nearest_refseq=NM_000724
 
|nearest_refseq=NM_000724
 
|nearest_unigene=Hs.59093
 
|nearest_unigene=Hs.59093
|num_trans=11
+
|num_trans=783
 
|species=human
 
|species=human
 
|start=18340746
 
|start=18340746

Latest revision as of 19:03, 19 July 2021

Basic information about the TSS


TSS ID:hg_104130.1
Species:human
Chr:chr10
TSS Classification:yes
Start:18340746
End:18340786
Strand:+
TSS Score:1
Start of the center position in the TSS region:18340766
End of the center position in the TSS region:18340767



Gene and protein annotation


Transcript_name:ENST00000498816.1
Distance:-30
GeneID:783
HGNC/MGI_ID:HGNC:1402
UniProt_ID:
Gene_name:calcium voltage-gated channel auxiliary subunit beta 2
Gene_symbol:CACNB2
Gene_synonyms:
Gene_source:HGNC:1402



Transcript annotation


Transcript_name:ENST00000498816.1
Distance:-30
Num_trans:783
All_trans:HGNC:1402



TATA-Box annotation


Distance to TSS:57
Nearest PromoterID:NM_201590
Entrez ID:783
Nearest Unigene:Hs.59093
Nearest Refseq:NM_000724
Nearest Ensembl:ENSG00000165995
Gene Name:calcium voltage-gated channel auxiliary subunit beta 2
Gene Alias:CACNLB2|CAVB2|MYSB
Gene Description:calcium voltage-gated channel auxiliary subunit beta 2
Gene Type:protein-coding
CpG%:0.015
GC%:0.452736
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):