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Difference between revisions of "TSS:Hg 104313.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000376454.8:12 NM_019590:12 AL833280:38 ENST00000635504.1:41 BC136521:47 BC144227:47 ENST00000376456.8:-322 ENST00000458595.5:-322 ENST00000376452.7:-322 ENST00000430453.6:-322 NM_001282767:-322 NM_001282768:-322 AK091142:-322
+
|all_trans=HGNC:25428
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.05
 
|cpg_percent=0.05
Line 22: Line 22:
 
|nearest_refseq=NM_019590
 
|nearest_refseq=NM_019590
 
|nearest_unigene=Hs.445885
 
|nearest_unigene=Hs.445885
|num_trans=13
+
|num_trans=56243
 
|species=human
 
|species=human
 
|start=24209112
 
|start=24209112
 
|start_of_center_position=24209119
 
|start_of_center_position=24209119
 
|strand=+
 
|strand=+
|transcript_name=ENST00000376454.8 NM_019590
+
|transcript_name=ENST00000376454.8
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_104313.1
 
|tss_id=hg_104313.1

Latest revision as of 19:07, 19 July 2021

Basic information about the TSS


TSS ID:hg_104313.1
Species:human
Chr:chr10
TSS Classification:yes
Start:24209112
End:24209126
Strand:+
TSS Score:1
Start of the center position in the TSS region:24209119
End of the center position in the TSS region:24209120



Gene and protein annotation


Transcript_name:ENST00000376454.8
Distance:12
GeneID:56243
HGNC/MGI_ID:HGNC:25428
UniProt_ID:Q5T5P2
Gene_name:KIAA1217
Gene_symbol:KIAA1217
Gene_synonyms:DKFZP761L0424 ETL4 SKT
Gene_source:HGNC:25428



Transcript annotation


Transcript_name:ENST00000376454.8
Distance:12
Num_trans:56243
All_trans:HGNC:25428



TATA-Box annotation


Distance to TSS:-19
Nearest PromoterID:NM_019590
Entrez ID:56243
Nearest Unigene:Hs.445885
Nearest Refseq:NM_019590
Nearest Ensembl:ENSG00000120549
Gene Name:KIAA1217
Gene Alias:ETL4|SKT
Gene Description:KIAA1217
Gene Type:protein-coding
CpG%:0.05
GC%:0.572139
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):