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Difference between revisions of "TSS:Hg 104525.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000446807.5:0 BC031656:0 ENST00000427063.6:-2 BC073888:-2 ENST00000423223.5:6 ENST00000445521.5:11 BC063483:11 ENST00000414457.5:-16 ENST00000608994.5:-17 ENST00000609413.5:-17 ENST00000623175.3:17 AK056080:-17 AL832706:19 BC107795:-20 ENST00000438202.5:22 BC050354:-27 ENST00000413405.5:-35 BC066966:-35 ENST00000646086.1:38 NR_003930:-40 NR_110923:-40 NR_110924:-40 NR_110925:-40 NR_110926:-40 NR_110929:-40 NR_110920:-40 NR_110921:-40 NR_110922:-40 NR_110927:-40 ENST00000430295.5:-172
+
|all_trans=HGNC:51219
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.095
 
|cpg_percent=0.095
Line 22: Line 22:
 
|nearest_refseq=NR_003930
 
|nearest_refseq=NR_003930
 
|nearest_unigene=Hs.499209
 
|nearest_unigene=Hs.499209
|num_trans=30
+
|num_trans=102724316
 
|species=human
 
|species=human
 
|start=29409573
 
|start=29409573

Latest revision as of 19:12, 19 July 2021

Basic information about the TSS


TSS ID:hg_104525.1
Species:human
Chr:chr10
TSS Classification:yes
Start:29409573
End:29409580
Strand:+
TSS Score:1
Start of the center position in the TSS region:29409576
End of the center position in the TSS region:29409577



Gene and protein annotation


Transcript_name:ENST00000446807.5 BC031656
Distance:0
GeneID:102724316
HGNC/MGI_ID:HGNC:51219
UniProt_ID:
Gene_name:SVIL antisense RNA 1
Gene_symbol:SVIL-AS1
Gene_synonyms:RP11-534G20.3
Gene_source:HGNC:51219



Transcript annotation


Transcript_name:ENST00000446807.5 BC031656
Distance:0
Num_trans:102724316
All_trans:HGNC:51219



TATA-Box annotation


Distance to TSS:43
Nearest PromoterID:NR_110920
Entrez ID:102724316
Nearest Unigene:Hs.499209
Nearest Refseq:NR_003930
Nearest Ensembl:ENSG00000224597
Gene Name:SVIL antisense RNA 1
Gene Alias:-
Gene Description:SVIL antisense RNA 1
Gene Type:ncRNA
CpG%:0.095
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):