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Difference between revisions of "TSS:Hg 104789.1"

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Line 3: Line 3:
 
|5LPG=
 
|5LPG=
 
|LOG5=
 
|LOG5=
|all_trans=BC040450:0 J03600:0 J03571:0 BC034464:-9 AB590536:16 HQ258335:18 KJ890662:18 KR711721:18 ENST00000374391.7:-20 ENST00000612635.4:20 NM_000698:-20 NM_001320861:-20 NM_001320862:-20 NM_001256153:-20 AK315223:-20 JQ728550:20 HM592258:20 HM592259:20 HM592260:20 HM592261:20 AK225603:-23 BC130332:-23 BC132677:-23 BC143985:-23 BC143986:-23 AB208946:-55 ENST00000542434.5:-60 NM_001256154:-70
+
|all_trans=HGNC:435
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.115
 
|cpg_percent=0.115
Line 25: Line 25:
 
|nearest_refseq=NM_000698
 
|nearest_refseq=NM_000698
 
|nearest_unigene=Hs.89499
 
|nearest_unigene=Hs.89499
|num_trans=28
+
|num_trans=240
 
|species=human
 
|species=human
 
|start=45374235
 
|start=45374235

Latest revision as of 19:17, 19 July 2021

Basic information about the TSS


TSS ID:hg_104789.1
Species:human
Chr:chr10
TSS Classification:yes
Start:45374235
End:45374260
Strand:+
TSS Score:1
Start of the center position in the TSS region:45374247
End of the center position in the TSS region:45374248



Gene and protein annotation


Transcript_name:BC040450 J03600 J03571
Distance:0
GeneID:240
HGNC/MGI_ID:HGNC:435
UniProt_ID:
Gene_name:arachidonate 5-lipoxygenase
Gene_symbol:ALOX5
Gene_synonyms:5-LOX
Gene_source:HGNC:435



Transcript annotation


Transcript_name:BC040450 J03600 J03571
Distance:0
Num_trans:240
All_trans:HGNC:435



TATA-Box annotation


Distance to TSS:32
Nearest PromoterID:NM_001320861
Entrez ID:240
Nearest Unigene:Hs.89499
Nearest Refseq:NM_000698
Nearest Ensembl:ENSG00000012779
Gene Name:arachidonate 5-lipoxygenase
Gene Alias:5-LO|5-LOX|5LPG|LOG5
Gene Description:arachidonate 5-lipoxygenase
Gene Type:protein-coding
CpG%:0.115
GC%:0.741294
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):