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Difference between revisions of "TSS:Hg 10572.1"

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Line 6: Line 6:
 
|SDH2=
 
|SDH2=
 
|SDHIP=
 
|SDHIP=
|all_trans=U17248:-2 LF383925:-21 MA619502:-21 BC007840:-21 ENST00000375499.8:104 NM_003000:104 AK312056:104 ENST00000466613.2:105 KJ897533:117 KJ897534:117 KR710093:117 KR710094:117 KR710095:117 KR710096:117 ENST00000485515.5:129 DQ403007:144
+
|all_trans=HGNC:10681
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.115
 
|cpg_percent=0.115
Line 28: Line 28:
 
|nearest_refseq=NM_003000
 
|nearest_refseq=NM_003000
 
|nearest_unigene=Hs.465924
 
|nearest_unigene=Hs.465924
|num_trans=16
+
|num_trans=6390
 
|species=human
 
|species=human
 
|start=17054135
 
|start=17054135

Latest revision as of 19:37, 19 July 2021

Basic information about the TSS


TSS ID:hg_10572.1
Species:human
Chr:chr1
TSS Classification:yes
Start:17054135
End:17054149
Strand:-
TSS Score:1
Start of the center position in the TSS region:17054142
End of the center position in the TSS region:17054143



Gene and protein annotation


Transcript_name:U17248
Distance:-2
GeneID:6390
HGNC/MGI_ID:HGNC:10681
UniProt_ID:
Gene_name:succinate dehydrogenase complex iron sulfur subunit B
Gene_symbol:SDHB
Gene_synonyms:
Gene_source:HGNC:10681



Transcript annotation


Transcript_name:U17248
Distance:-2
Num_trans:6390
All_trans:HGNC:10681



TATA-Box annotation


Distance to TSS:28
Nearest PromoterID:NM_003000
Entrez ID:6390
Nearest Unigene:Hs.465924
Nearest Refseq:NM_003000
Nearest Ensembl:ENSG00000117118
Gene Name:succinate dehydrogenase complex iron sulfur subunit B
Gene Alias:CWS2|IP|PGL4|SDH|SDH1|SDH2|SDHIP
Gene Description:succinate dehydrogenase complex iron sulfur subunit B
Gene Type:protein-coding
CpG%:0.115
GC%:0.671642
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):