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Difference between revisions of "TSS:Hg 105842.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK309980:0 ENST00000372273.7:-7 AL832483:-7 NM_001270369:-20 NM_001270368:-20 NM_001270367:-20 AK300490:-30 NR_072984:156 NR_072985:156 NR_072986:156 NR_072987:156 NM_001270374:156 ENST00000467529.5:181 AL832397:181 ENST00000463029.5:184 AK310160:191 AK311563:191 BX537803:192 ENST00000476173.5:206 ENST00000483732.5:239 CR457310:-343 KJ894792:-345 ENST00000372274.5:-351 ENST00000372275.5:-361 AK023325:-373 BC022252:-373 ENST00000372281.8:-378 NM_025125:-378 AK222536:-378 ENST00000372277.7:-397 ENST00000472622.5:-397 ENST00000613758.4:-397 NM_001270371:-397 NM_001270370:-397 NM_001270373:-397 NM_001270372:-397
+
|all_trans=HGNC:25804
 
|bA369J21.6=
 
|bA369J21.6=
 
|chr=chr10
 
|chr=chr10
Line 23: Line 23:
 
|nearest_refseq=NM_025125
 
|nearest_refseq=NM_025125
 
|nearest_unigene=Hs.169982
 
|nearest_unigene=Hs.169982
|num_trans=36
+
|num_trans=80195
 
|species=human
 
|species=human
 
|start=80079042
 
|start=80079042

Latest revision as of 19:39, 19 July 2021

Basic information about the TSS


TSS ID:hg_105842.1
Species:human
Chr:chr10
TSS Classification:yes
Start:80079042
End:80079089
Strand:+
TSS Score:1
Start of the center position in the TSS region:80079065
End of the center position in the TSS region:80079066



Gene and protein annotation


Transcript_name:AK309980
Distance:0
GeneID:80195
HGNC/MGI_ID:HGNC:25804
UniProt_ID:
Gene_name:transmembrane protein 254
Gene_symbol:TMEM254
Gene_synonyms:FLJ13263 bA369J21.6
Gene_source:HGNC:25804



Transcript annotation


Transcript_name:AK309980
Distance:0
Num_trans:80195
All_trans:HGNC:25804



TATA-Box annotation


Distance to TSS:43
Nearest PromoterID:NM_001270367
Entrez ID:80195
Nearest Unigene:Hs.169982
Nearest Refseq:NM_025125
Nearest Ensembl:ENSG00000133678
Gene Name:transmembrane protein 254
Gene Alias:C10orf57|bA369J21.6
Gene Description:transmembrane protein 254
Gene Type:protein-coding
CpG%:0.045
GC%:0.621891
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):-46(TCTTATATGGGG,+,0.00)