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Difference between revisions of "TSS:Hg 107311.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC018116:-20 ENST00000392870.3:-38 NM_005308:-38 BC064506:63 L15388:69 AK309761:75 AK313012:216 AB590773:296
+
|all_trans=HGNC:4544
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.065
 
|cpg_percent=0.065
Line 22: Line 22:
 
|nearest_refseq=NM_005308
 
|nearest_refseq=NM_005308
 
|nearest_unigene=Hs.524625
 
|nearest_unigene=Hs.524625
|num_trans=8
+
|num_trans=2869
 
|species=human
 
|species=human
 
|start=119207608
 
|start=119207608

Latest revision as of 20:12, 19 July 2021

Basic information about the TSS


TSS ID:hg_107311.1
Species:human
Chr:chr10
TSS Classification:yes
Start:119207608
End:119207622
Strand:+
TSS Score:1
Start of the center position in the TSS region:119207615
End of the center position in the TSS region:119207616



Gene and protein annotation


Transcript_name:BC018116
Distance:-20
GeneID:2869
HGNC/MGI_ID:HGNC:4544
UniProt_ID:
Gene_name:G protein-coupled receptor kinase 5
Gene_symbol:GRK5
Gene_synonyms:
Gene_source:HGNC:4544



Transcript annotation


Transcript_name:BC018116
Distance:-20
Num_trans:2869
All_trans:HGNC:4544



TATA-Box annotation


Distance to TSS:44
Nearest PromoterID:NM_005308
Entrez ID:2869
Nearest Unigene:Hs.524625
Nearest Refseq:NM_005308
Nearest Ensembl:ENSG00000198873
Gene Name:G protein-coupled receptor kinase 5
Gene Alias:FP2025|GPRK5
Gene Description:G protein-coupled receptor kinase 5
Gene Type:protein-coding
CpG%:0.065
GC%:0.686567
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):-33(AGGCATTAAAGC,-,0.00)