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Difference between revisions of "TSS:Hg 111702.1"

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{{TSSDetail
 
{{TSSDetail
 
|TIAR=
 
|TIAR=
|all_trans=AK291239:115 ENST00000479729.1:145 AK290984:149 ENST00000436547.7:-177 ENST00000489822.5:-177 AL833106:-177 AK290695:-195 ENST00000497671.5:-242 NM_001323968:-242 NM_001323967:-242 NM_001323965:-242 NM_001323964:-242 NM_001323969:-242 NM_001323970:-242 NM_003252:-242 NR_136663:-242 NR_136662:-242 NR_136661:-242 NM_001033925:-242 BC030025:-242 M96954:267 ENST00000369093.6:282 AK295243:303 AY633610:304 AB527493:310
+
|all_trans=HGNC:11804
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.1
 
|cpg_percent=0.1
Line 23: Line 23:
 
|nearest_refseq=NM_003252
 
|nearest_refseq=NM_003252
 
|nearest_unigene=Hs.501203
 
|nearest_unigene=Hs.501203
|num_trans=25
+
|num_trans=7073
 
|species=human
 
|species=human
 
|start=119596776
 
|start=119596776

Latest revision as of 21:47, 19 July 2021

Basic information about the TSS


TSS ID:hg_111702.1
Species:human
Chr:chr10
TSS Classification:yes
Start:119596776
End:119596787
Strand:-
TSS Score:1
Start of the center position in the TSS region:119596781
End of the center position in the TSS region:119596782



Gene and protein annotation


Transcript_name:AK291239
Distance:115
GeneID:7073
HGNC/MGI_ID:HGNC:11804
UniProt_ID:A8K5C4
Gene_name:TIA1 cytotoxic granule associated RNA binding protein like 1
Gene_symbol:TIAL1
Gene_synonyms:TIAR
Gene_source:HGNC:11804



Transcript annotation


Transcript_name:AK291239
Distance:115
Num_trans:7073
All_trans:HGNC:11804



TATA-Box annotation


Distance to TSS:247
Nearest PromoterID:NM_001323969
Entrez ID:7073
Nearest Unigene:Hs.501203
Nearest Refseq:NM_003252
Nearest Ensembl:ENSG00000151923
Gene Name:TIA1 cytotoxic granule associated RNA binding protein like 1
Gene Alias:TCBP|TIAR
Gene Description:TIA1 cytotoxic granule associated RNA binding protein like 1
Gene Type:protein-coding
CpG%:0.1
GC%:0.706468
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):