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Difference between revisions of "TSS:Hg 112265.1"

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Line 3: Line 3:
 
|P2=
 
|P2=
 
|RPP2=
 
|RPP2=
|all_trans=ENST00000532004.5:189 BC005354:189 ENST00000321153.9:191 NM_001004:191 D28411:191 BC005920:191 AK311954:192 AK130959:192 M17887:192 ENST00000530797.5:208 BC062314:211 BC007573:215 AK056066:221 ENST00000524867.1:227 KJ892048:458 CR542248:459 CR542212:459 ENST00000530398.1:493
+
|all_trans=HGNC:10377
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.09
 
|cpg_percent=0.09
Line 25: Line 25:
 
|nearest_refseq=NM_001004
 
|nearest_refseq=NM_001004
 
|nearest_unigene=Hs.437594
 
|nearest_unigene=Hs.437594
|num_trans=18
+
|num_trans=6181
 
|species=human
 
|species=human
 
|start=809771
 
|start=809771

Latest revision as of 21:59, 19 July 2021

Basic information about the TSS


TSS ID:hg_112265.1
Species:human
Chr:chr11
TSS Classification:yes
Start:809771
End:809776
Strand:+
TSS Score:1
Start of the center position in the TSS region:809773
End of the center position in the TSS region:809774



Gene and protein annotation


Transcript_name:ENST00000532004.5 BC005354
Distance:189
GeneID:6181
HGNC/MGI_ID:HGNC:10377
UniProt_ID:
Gene_name:ribosomal protein lateral stalk subunit P2
Gene_symbol:RPLP2
Gene_synonyms:LP2 MGC71408 P2 RPP2
Gene_source:HGNC:10377



Transcript annotation


Transcript_name:ENST00000532004.5 BC005354
Distance:189
Num_trans:6181
All_trans:HGNC:10377



TATA-Box annotation


Distance to TSS:-193
Nearest PromoterID:NM_001004
Entrez ID:6181
Nearest Unigene:Hs.437594
Nearest Refseq:NM_001004
Nearest Ensembl:ENSG00000177600
Gene Name:ribosomal protein lateral stalk subunit P2
Gene Alias:D11S2243E|LP2|P2|RPP2
Gene Description:ribosomal protein lateral stalk subunit P2
Gene Type:protein-coding
CpG%:0.09
GC%:0.641791
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):-32(CGCTATAAGAGC,-,0.00)