Difference between revisions of "TSS:Hg 112300.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:28703 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_173584 | |nearest_refseq=NM_173584 | ||
|nearest_unigene=Hs.660936 | |nearest_unigene=Hs.660936 | ||
| − | |num_trans= | + | |num_trans=283229 |
|species=human | |species=human | ||
|start=828151 | |start=828151 | ||
|start_of_center_position=828157 | |start_of_center_position=828157 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000450448.5 | + | |transcript_name=ENST00000450448.5 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_112300.1 | |tss_id=hg_112300.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q8N4Y2 | |uniprot_id=Q8N4Y2 | ||
}} | }} | ||
Latest revision as of 21:59, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 828157 |
|---|---|
| End of the center position in the TSS region: | 828158 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000450448.5 |
|---|---|
| Distance: | 97 |
| Num_trans: | 283229 |
| All_trans: | HGNC:28703 |
TATA-Box annotation
| Distance to TSS: | -103 |
|---|---|
| Nearest PromoterID: | NM_173584 |
| Entrez ID: | 283229 |
| Nearest Unigene: | Hs.660936 |
| Nearest Refseq: | NM_173584 |
| Nearest Ensembl: | ENSG00000177685 |
| Gene Name: | calcium release activated channel regulator 2B |
| Gene Alias: | EFCAB4A |
| Gene Description: | calcium release activated channel regulator 2B |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
