Personal tools

Difference between revisions of "TSS:Hg 129454.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000667501.1:0 ENST00000670937.1:0 ENST00000655933.1:-1 ENST00000663603.1:-24 ENST00000412084.1:-72 NR_104634:-72
+
|all_trans=HGNC:53409
 
|chr=chr12
 
|chr=chr12
 
|cpg_percent=0.055
 
|cpg_percent=0.055
Line 22: Line 22:
 
|nearest_refseq=NR_104634
 
|nearest_refseq=NR_104634
 
|nearest_unigene=Hs.282397
 
|nearest_unigene=Hs.282397
|num_trans=6
+
|num_trans=100506159
 
|species=human
 
|species=human
 
|start=9943398
 
|start=9943398

Latest revision as of 04:13, 20 July 2021

Basic information about the TSS


TSS ID:hg_129454.1
Species:human
Chr:chr12
TSS Classification:yes
Start:9943398
End:9943423
Strand:-
TSS Score:1
Start of the center position in the TSS region:9943410
End of the center position in the TSS region:9943411



Gene and protein annotation


Transcript_name:ENST00000667501.1 ENST00000670937.1
Distance:0
GeneID:100506159
HGNC/MGI_ID:HGNC:53409
UniProt_ID:
Gene_name:long intergenic non-protein coding RNA 2470
Gene_symbol:LINC02470
Gene_synonyms:AC091814.2
Gene_source:HGNC:53409



Transcript annotation


Transcript_name:ENST00000667501.1 ENST00000670937.1
Distance:0
Num_trans:100506159
All_trans:HGNC:53409



TATA-Box annotation


Distance to TSS:84
Nearest PromoterID:NR_104634
Entrez ID:100506159
Nearest Unigene:Hs.282397
Nearest Refseq:NR_104634
Nearest Ensembl:ENSG00000225231
Gene Name:long intergenic non-protein coding RNA 2470
Gene Alias:-
Gene Description:long intergenic non-protein coding RNA 2470
Gene Type:ncRNA
CpG%:0.055
GC%:0.626866
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):