Difference between revisions of "TSS:Hg 129649.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:9340 |
|chr=chr12 | |chr=chr12 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_002723 | |nearest_refseq=NM_002723 | ||
|nearest_unigene=Hs.528651 | |nearest_unigene=Hs.528651 | ||
| − | |num_trans= | + | |num_trans=5545 |
|species=human | |species=human | ||
|start=11310522 | |start=11310522 | ||
| Line 28: | Line 28: | ||
|strand=- | |strand=- | ||
|tata_box=63(CTCTTTATAAAG,-,0.00),65(CTTTATAAAGGG,+,0.00),65(CTTTATAAAGGG,-,0.00) | |tata_box=63(CTCTTTATAAAG,-,0.00),65(CTTTATAAAGGG,+,0.00),65(CTTTATAAAGGG,-,0.00) | ||
| − | |transcript_name=ENST00000279575.7 | + | |transcript_name=ENST00000279575.7 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_129649.1 | |tss_id=hg_129649.1 | ||
Latest revision as of 04:18, 20 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 11310530 |
|---|---|
| End of the center position in the TSS region: | 11310531 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000279575.7 |
|---|---|
| Distance: | 87 |
| Num_trans: | 5545 |
| All_trans: | HGNC:9340 |
TATA-Box annotation
| Distance to TSS: | -96 |
|---|---|
| Nearest PromoterID: | NM_002723 |
| Entrez ID: | 5545 |
| Nearest Unigene: | Hs.528651 |
| Nearest Refseq: | NM_002723 |
| Nearest Ensembl: | ENSG00000230657 |
| Gene Name: | proline rich protein BstNI subfamily 4 |
| Gene Alias: | Po |
| Gene Description: | proline rich protein BstNI subfamily 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 63(CTCTTTATAAAG,-,0.00),65(CTTTATAAAGGG,+,0.00),65(CTTTATAAAGGG,-,0.00) |
