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Difference between revisions of "TSS:Hg 131284.1"

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Line 3: Line 3:
 
|HOXC11-AS1=
 
|HOXC11-AS1=
 
|NCRNA00072=
 
|NCRNA00072=
|all_trans=DQ926657:0 NR_003716:-78 ENST00000439545.1:-236 NR_047518:-236
+
|all_trans=HGNC:33510
 
|chr=chr12
 
|chr=chr12
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 25: Line 25:
 
|nearest_refseq=NR_003716
 
|nearest_refseq=NR_003716
 
|nearest_unigene=Hs.197076
 
|nearest_unigene=Hs.197076
|num_trans=4
+
|num_trans=100124700
 
|species=human
 
|species=human
 
|start=53968663
 
|start=53968663

Latest revision as of 04:53, 20 July 2021

Basic information about the TSS


TSS ID:hg_131284.1
Species:human
Chr:chr12
TSS Classification:yes
Start:53968663
End:53968678
Strand:-
TSS Score:1
Start of the center position in the TSS region:53968670
End of the center position in the TSS region:53968671



Gene and protein annotation


Transcript_name:DQ926657
Distance:0
GeneID:100124700
HGNC/MGI_ID:HGNC:33510
UniProt_ID:
Gene_name:HOX transcript antisense RNA
Gene_symbol:HOTAIR
Gene_synonyms:HOXC-AS4 HOXC11-AS1 NCRNA00072
Gene_source:HGNC:33510



Transcript annotation


Transcript_name:DQ926657
Distance:0
Num_trans:100124700
All_trans:HGNC:33510



TATA-Box annotation


Distance to TSS:85
Nearest PromoterID:NR_003716
Entrez ID:100124700
Nearest Unigene:Hs.197076
Nearest Refseq:NR_003716
Nearest Ensembl:ENSG00000228630
Gene Name:HOX transcript antisense RNA
Gene Alias:HOXAS|HOXC-AS4|HOXC11-AS1|NCRNA00072
Gene Description:HOX transcript antisense RNA
Gene Type:ncRNA
CpG%:0.02
GC%:0.597015
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):