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Difference between revisions of "TSS:Hg 134457.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|PABPL3=
 
|PABPL3=
|all_trans=AF132026:-10 DQ895297:13 DQ892103:13 KJ897288:13 BC027617:-14 BC045608:-24 AK313336:-28 AL136900:-31 ENST00000281589.5:-50 NM_030979:-50
+
|all_trans=HGNC:8556
 
|chr=chr13
 
|chr=chr13
 
|cpg_percent=0.105
 
|cpg_percent=0.105
Line 23: Line 23:
 
|nearest_refseq=NM_030979
 
|nearest_refseq=NM_030979
 
|nearest_unigene=Hs.458280
 
|nearest_unigene=Hs.458280
|num_trans=10
+
|num_trans=5042
 
|species=human
 
|species=human
 
|start=25096185
 
|start=25096185

Latest revision as of 06:02, 20 July 2021

Basic information about the TSS


TSS ID:hg_134457.1
Species:human
Chr:chr13
TSS Classification:yes
Start:25096185
End:25096186
Strand:+
TSS Score:1
Start of the center position in the TSS region:25096185
End of the center position in the TSS region:25096186



Gene and protein annotation


Transcript_name:AF132026
Distance:-10
GeneID:5042
HGNC/MGI_ID:HGNC:8556
UniProt_ID:
Gene_name:poly(A) binding protein cytoplasmic 3
Gene_symbol:PABPC3
Gene_synonyms:PABP3 tPABP
Gene_source:HGNC:8556



Transcript annotation


Transcript_name:AF132026
Distance:-10
Num_trans:5042
All_trans:HGNC:8556



TATA-Box annotation


Distance to TSS:48
Nearest PromoterID:NM_030979
Entrez ID:5042
Nearest Unigene:Hs.458280
Nearest Refseq:NM_030979
Nearest Ensembl:ENSG00000151846
Gene Name:poly(A) binding protein cytoplasmic 3
Gene Alias:PABP3|PABPL3|tPABP
Gene Description:poly(A) binding protein cytoplasmic 3
Gene Type:protein-coding
CpG%:0.105
GC%:0.691542
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):