Personal tools

Difference between revisions of "TSS:Hg 154456.1"

From referenceTSS

Jump to: navigation, search
 
Line 2: Line 2:
 
|SMAP-8=
 
|SMAP-8=
 
|SMAP8=
 
|SMAP8=
|all_trans=ENST00000258187.9:0 ENST00000569404.5:22 ENST00000569539.5:28 ENST00000564126.5:31 ENST00000562764.5:-33 NM_020465:33 NM_001378342:33 NM_001378338:33 NM_001378345:33 NM_001378346:33 NM_001378339:33 ENST00000562725.5:34 ENST00000565304.5:41 ENST00000567667.5:43 AB021172:63 ENST00000564207.5:-294 ENST00000394282.8:342
+
|all_trans=HGNC:14466
 
|chr=chr16
 
|chr=chr16
 
|cpg_percent=0.165
 
|cpg_percent=0.165
Line 24: Line 24:
 
|nearest_refseq=NM_020465
 
|nearest_refseq=NM_020465
 
|nearest_unigene=Hs.322430
 
|nearest_unigene=Hs.322430
|num_trans=17
+
|num_trans=65009
 
|species=human
 
|species=human
 
|start=58463663
 
|start=58463663

Latest revision as of 13:17, 20 July 2021

Basic information about the TSS


TSS ID:hg_154456.1
Species:human
Chr:chr16
TSS Classification:yes
Start:58463663
End:58463682
Strand:+
TSS Score:1
Start of the center position in the TSS region:58463672
End of the center position in the TSS region:58463673



Gene and protein annotation


Transcript_name:ENST00000258187.9
Distance:0
GeneID:65009
HGNC/MGI_ID:HGNC:14466
UniProt_ID:A0A024R6V8
Gene_name:NDRG family member 4
Gene_symbol:NDRG4
Gene_synonyms:KIAA1180 SMAP-8
Gene_source:HGNC:14466



Transcript annotation


Transcript_name:ENST00000258187.9
Distance:0
Num_trans:65009
All_trans:HGNC:14466



TATA-Box annotation


Distance to TSS:28
Nearest PromoterID:NM_020465
Entrez ID:65009
Nearest Unigene:Hs.322430
Nearest Refseq:NM_020465
Nearest Ensembl:ENSG00000103034
Gene Name:NDRG family member 4
Gene Alias:BDM1|SMAP-8|SMAP8
Gene Description:NDRG family member 4
Gene Type:protein-coding
CpG%:0.165
GC%:0.840796
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):