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Difference between revisions of "TSS:Hg 168282.1"

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Line 2: Line 2:
 
|PTDSR=
 
|PTDSR=
 
|PTDSR1=
 
|PTDSR1=
|all_trans=ENST00000303996.10:-16 ENST00000542934.5:-16 EF527406:-16 EF527407:-16 ENST00000617192.4:-31 ENST00000445478.6:76 AK294816:76 ENST00000397625.9:149 NM_001081461:149 NM_015167:149 BC047003:165 AK021780:179 AK314541:217 ENST00000585429.1:252 AB011157:274 BC066654:274 AB073711:280 KJ893343:280 AB383913:281
+
|all_trans=HGNC:19355
 
|chr=chr17
 
|chr=chr17
 
|cpg_percent=0.125
 
|cpg_percent=0.125
Line 24: Line 24:
 
|nearest_refseq=NM_015167
 
|nearest_refseq=NM_015167
 
|nearest_unigene=Hs.514505
 
|nearest_unigene=Hs.514505
|num_trans=19
+
|num_trans=23210
 
|species=human
 
|species=human
 
|start=76726754
 
|start=76726754

Latest revision as of 18:21, 20 July 2021

Basic information about the TSS


TSS ID:hg_168282.1
Species:human
Chr:chr17
TSS Classification:yes
Start:76726754
End:76726768
Strand:-
TSS Score:1
Start of the center position in the TSS region:76726761
End of the center position in the TSS region:76726762



Gene and protein annotation


Transcript_name:ENST00000303996.10 ENST00000542934.5 EF527406 EF527407
Distance:-16
GeneID:23210
HGNC/MGI_ID:HGNC:19355
UniProt_ID:B2WTI3 B2WTI4
Gene_name:jumonji domain containing 6, arginine demethylase and lysine hydroxylase
Gene_symbol:JMJD6
Gene_synonyms:KIAA0585 PTDSR1
Gene_source:HGNC:19355



Transcript annotation


Transcript_name:ENST00000303996.10 ENST00000542934.5 EF527406 EF527407
Distance:-16
Num_trans:23210
All_trans:HGNC:19355



TATA-Box annotation


Distance to TSS:38
Nearest PromoterID:NM_015167
Entrez ID:23210
Nearest Unigene:Hs.514505
Nearest Refseq:NM_015167
Nearest Ensembl:ENSG00000070495
Gene Name:jumonji domain containing 6, arginine demethylase and lysine hydroxylase
Gene Alias:PSR|PTDSR|PTDSR1
Gene Description:jumonji domain containing 6, arginine demethylase and lysine hydroxylase
Gene Type:protein-coding
CpG%:0.125
GC%:0.731343
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):