Difference between revisions of "TSS:Hg 181880.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000084795.9:0 uc061auk.1:0 BC000374:0 CU692404:0 KJ905903:0 DQ891451:0 KJ897488:0 DQ894630:0 AB464158:0 DQ403032:57 ENST00000546623.5:71 uc061auo....") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |SK-2= |
| + | |SPK 2= | ||
| + | |SPK-2= | ||
| + | |all_trans=HGNC:10310 | ||
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1300 |
|end=48617888 | |end=48617888 | ||
| − | |entrez_id= | + | |end_of_center_position=48617878 |
| + | |entrez_id=6141 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| − | |gene_alias= | + | |gene_alias=DBA18{{!}}L18 |
| − | |gene_description= | + | |gene_description=ribosomal protein L18 |
|gene_id=6141 | |gene_id=6141 | ||
|gene_name=ribosomal protein L18 | |gene_name=ribosomal protein L18 | ||
| Line 17: | Line 21: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:10310 | |hgnc_mgi_id=HGNC:10310 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000063177 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_073022 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_000979 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.515517 |
| − | |num_trans= | + | |num_trans=6141 |
|species=human | |species=human | ||
|start=48617867 | |start=48617867 | ||
| + | |start_of_center_position=48617877 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000084795.9 | + | |transcript_name=ENST00000084795.9 BC000374 CU692404 DQ891451 DQ894630 AB464158 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_181880.1 | |tss_id=hg_181880.1 | ||
Latest revision as of 23:17, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 48617877 |
|---|---|
| End of the center position in the TSS region: | 48617878 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000084795.9 BC000374 CU692404 DQ891451 DQ894630 AB464158 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6141 |
| All_trans: | HGNC:10310 |
TATA-Box annotation
| Distance to TSS: | 1300 |
|---|---|
| Nearest PromoterID: | NR_073022 |
| Entrez ID: | 6141 |
| Nearest Unigene: | Hs.515517 |
| Nearest Refseq: | NM_000979 |
| Nearest Ensembl: | ENSG00000063177 |
| Gene Name: | ribosomal protein L18 |
| Gene Alias: | DBA18|L18 |
| Gene Description: | ribosomal protein L18 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
