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Difference between revisions of "TSS:Hg 189974.1"

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Line 8: Line 8:
 
|PN-II=
 
|PN-II=
 
|PN2=
 
|PN2=
|all_trans=M18734:0 LF339757:0 MA575334:0
+
|all_trans=HGNC:620
 
|chr=chr21
 
|chr=chr21
 
|cpg_percent=0.045
 
|cpg_percent=0.045
Line 30: Line 30:
 
|nearest_refseq=NM_000484
 
|nearest_refseq=NM_000484
 
|nearest_unigene=Hs.434980
 
|nearest_unigene=Hs.434980
|num_trans=3
+
|num_trans=351
 
|species=human
 
|species=human
 
|start=25955674
 
|start=25955674
 
|start_of_center_position=25955709
 
|start_of_center_position=25955709
 
|strand=-
 
|strand=-
|transcript_name=M18734 LF339757 MA575334
+
|transcript_name=M18734
 
|tss_classification=no
 
|tss_classification=no
 
|tss_id=hg_189974.1
 
|tss_id=hg_189974.1

Latest revision as of 02:12, 21 July 2021

Basic information about the TSS


TSS ID:hg_189974.1
Species:human
Chr:chr21
TSS Classification:no
Start:25955674
End:25955745
Strand:-
TSS Score:1
Start of the center position in the TSS region:25955709
End of the center position in the TSS region:25955710



Gene and protein annotation


Transcript_name:M18734
Distance:0
GeneID:351
HGNC/MGI_ID:HGNC:620
UniProt_ID:
Gene_name:amyloid beta precursor protein
Gene_symbol:APP
Gene_synonyms:alpha-sAPP
Gene_source:HGNC:620



Transcript annotation


Transcript_name:M18734
Distance:0
Num_trans:351
All_trans:HGNC:620



TATA-Box annotation


Distance to TSS:184680
Nearest PromoterID:NM_001136016
Entrez ID:351
Nearest Unigene:Hs.434980
Nearest Refseq:NM_000484
Nearest Ensembl:ENSG00000142192
Gene Name:amyloid beta precursor protein
Gene Alias:AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4
Gene Description:amyloid beta precursor protein
Gene Type:protein-coding
CpG%:0.045
GC%:0.477612
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):