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Difference between revisions of "TSS:Hg 190961.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|NCRNA00017=
 
|NCRNA00017=
|all_trans=ENST00000329743.3:5 NR_024482:10 NR_024483:10 ENST00000431923.1:20 AF307448:20
+
|all_trans=HGNC:1842
 
|chr=chr22
 
|chr=chr22
 
|cpg_percent=0.145
 
|cpg_percent=0.145
Line 23: Line 23:
 
|nearest_refseq=NR_024482
 
|nearest_refseq=NR_024482
 
|nearest_unigene=Hs.660066
 
|nearest_unigene=Hs.660066
|num_trans=5
+
|num_trans=100130717
 
|species=human
 
|species=human
 
|start=17159347
 
|start=17159347

Latest revision as of 02:33, 21 July 2021

Basic information about the TSS


TSS ID:hg_190961.1
Species:human
Chr:chr22
TSS Classification:yes
Start:17159347
End:17159379
Strand:+
TSS Score:1
Start of the center position in the TSS region:17159363
End of the center position in the TSS region:17159364



Gene and protein annotation


Transcript_name:ENST00000329743.3
Distance:5
GeneID:100130717
HGNC/MGI_ID:HGNC:1842
UniProt_ID:
Gene_name:HDHD5 antisense RNA 1
Gene_symbol:HDHD5-AS1
Gene_synonyms:NCRNA00017
Gene_source:HGNC:1842



Transcript annotation


Transcript_name:ENST00000329743.3
Distance:5
Num_trans:100130717
All_trans:HGNC:1842



TATA-Box annotation


Distance to TSS:-26
Nearest PromoterID:NR_024483
Entrez ID:100130717
Nearest Unigene:Hs.660066
Nearest Refseq:NR_024482
Nearest Ensembl:ENSG00000185837
Gene Name:HDHD5 antisense RNA 1
Gene Alias:CECR4|CECR5-AS1|NCRNA00017
Gene Description:HDHD5 antisense RNA 1
Gene Type:ncRNA
CpG%:0.145
GC%:0.716418
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):