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Difference between revisions of "TSS:Hg 219737.1"

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Line 3: Line 3:
 
|FTDALS=
 
|FTDALS=
 
|FTDALS1=
 
|FTDALS1=
|all_trans=ENST00000647196.1:-14 JN681271:-39 AK057806:-39 ENST00000379995.1:50 ENST00000619707.5:-61 ENST00000379997.7:-61 NM_001256054:-61 NM_145005:-61 ENST00000673600.1:311 AK291425:322 ENST00000380003.8:324 NM_018325:324 ENST00000644136.1:348 ENST00000488117.5:357 AL832467:357 AL832229:358
+
|all_trans=HGNC:28337
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.07
 
|cpg_percent=0.07
Line 25: Line 25:
 
|nearest_refseq=NM_018325
 
|nearest_refseq=NM_018325
 
|nearest_unigene=Hs.493639
 
|nearest_unigene=Hs.493639
|num_trans=16
+
|num_trans=203228
 
|species=human
 
|species=human
 
|start=27573804
 
|start=27573804

Latest revision as of 07:21, 21 July 2021

Basic information about the TSS


TSS ID:hg_219737.1
Species:human
Chr:chr9
TSS Classification:yes
Start:27573804
End:27573805
Strand:-
TSS Score:1
Start of the center position in the TSS region:27573804
End of the center position in the TSS region:27573805



Gene and protein annotation


Transcript_name:ENST00000647196.1
Distance:-14
GeneID:203228
HGNC/MGI_ID:HGNC:28337
UniProt_ID:A0A2R8Y5U5
Gene_name:C9orf72-SMCR8 complex subunit
Gene_symbol:C9orf72
Gene_synonyms:DENND9 DENNL72 MGC23980
Gene_source:HGNC:28337



Transcript annotation


Transcript_name:ENST00000647196.1
Distance:-14
Num_trans:203228
All_trans:HGNC:28337



TATA-Box annotation


Distance to TSS:61
Nearest PromoterID:NM_145005
Entrez ID:203228
Nearest Unigene:Hs.493639
Nearest Refseq:NM_018325
Nearest Ensembl:ENSG00000147894
Gene Name:C9orf72-SMCR8 complex subunit
Gene Alias:ALSFTD|DENND9|DENNL72|FTDALS|FTDALS1
Gene Description:C9orf72-SMCR8 complex subunit
Gene Type:protein-coding
CpG%:0.07
GC%:0.552239
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):