Difference between revisions of "TSS:Hg 220123.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|PAMM= | |PAMM= | ||
| − | |all_trans= | + | |all_trans=HGNC:28651 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_032333 | |nearest_refseq=NM_032333 | ||
|nearest_unigene=Hs.500333 | |nearest_unigene=Hs.500333 | ||
| − | |num_trans= | + | |num_trans=84293 |
|species=human | |species=human | ||
|start=80407748 | |start=80407748 | ||
| Line 29: | Line 29: | ||
|strand=+ | |strand=+ | ||
|tata_box=-92(TTTTTTAAAGAC,+,0.00) | |tata_box=-92(TTTTTTAAAGAC,+,0.00) | ||
| − | |transcript_name=ENST00000372188.5 | + | |transcript_name=ENST00000372188.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_220123.1 | |tss_id=hg_220123.1 | ||
Latest revision as of 07:25, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 80407748 |
|---|---|
| End of the center position in the TSS region: | 80407749 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000372188.5 |
|---|---|
| Distance: | 80 |
| Num_trans: | 84293 |
| All_trans: | HGNC:28651 |
TATA-Box annotation
| Distance to TSS: | -80 |
|---|---|
| Nearest PromoterID: | NM_001243779 |
| Entrez ID: | 84293 |
| Nearest Unigene: | Hs.500333 |
| Nearest Refseq: | NM_032333 |
| Nearest Ensembl: | ENSG00000122378 |
| Gene Name: | peroxiredoxin like 2A |
| Gene Alias: | Adrx|C10orf58|FAM213A|PAMM |
| Gene Description: | peroxiredoxin like 2A |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -92(TTTTTTAAAGAC,+,0.00) |
