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Difference between revisions of "TSS:Hg 223670.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000371077.9:-12 ENST00000611228.4:-12 NR_158768:-16 NM_001366232:-16 NM_001366235:-16 NM_001366234:-16 NM_001366233:-16 NM_152489:-16 NR_158769:-16 ENST00000371076.7:163 HM005529:163 BC029895:163 CU688784:406 DQ891312:406 DQ894496:406 KJ895622:406
+
|all_trans=HGNC:28559
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.08
 
|cpg_percent=0.08
Line 22: Line 22:
 
|nearest_refseq=NM_152489
 
|nearest_refseq=NM_152489
 
|nearest_unigene=Hs.388746
 
|nearest_unigene=Hs.388746
|num_trans=16
+
|num_trans=148581
 
|species=human
 
|species=human
 
|start=64203638
 
|start=64203638

Latest revision as of 08:05, 21 July 2021

Basic information about the TSS


TSS ID:hg_223670.1
Species:human
Chr:chr1
TSS Classification:yes
Start:64203638
End:64203644
Strand:+
TSS Score:1
Start of the center position in the TSS region:64203641
End of the center position in the TSS region:64203642



Gene and protein annotation


Transcript_name:ENST00000371077.9 ENST00000611228.4
Distance:-12
GeneID:148581
HGNC/MGI_ID:HGNC:28559
UniProt_ID:A0A0A0MRP4 Q5VVX9
Gene_name:ubiquitin conjugating enzyme E2 U
Gene_symbol:UBE2U
Gene_synonyms:MGC35130
Gene_source:HGNC:28559



Transcript annotation


Transcript_name:ENST00000371077.9 ENST00000611228.4
Distance:-12
Num_trans:148581
All_trans:HGNC:28559



TATA-Box annotation


Distance to TSS:18
Nearest PromoterID:NM_152489
Entrez ID:148581
Nearest Unigene:Hs.388746
Nearest Refseq:NM_152489
Nearest Ensembl:ENSG00000177414
Gene Name:ubiquitin conjugating enzyme E2 U
Gene Alias:-
Gene Description:ubiquitin conjugating enzyme E2 U
Gene Type:protein-coding
CpG%:0.08
GC%:0.656716
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):