Difference between revisions of "TSS:Hg 18597.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AY136822:-378 M55702:-433 |chr=chr2 |cpg_percent=0.06 |distance=-378 |distance_to_tss=82020 |end=1496434 |entrez_id=7173 |gc_percent=0.706468 |gene_alia...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |TDH2A= |
| + | |TPX= | ||
| + | |all_trans=HGNC:12015 | ||
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=82020 | |distance_to_tss=82020 | ||
|end=1496434 | |end=1496434 | ||
| + | |end_of_center_position=1496429 | ||
|entrez_id=7173 | |entrez_id=7173 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=MSA | + | |gene_alias=MSA{{!}}TDH2A{{!}}TPX |
|gene_description=thyroid peroxidase | |gene_description=thyroid peroxidase | ||
|gene_id=7173 | |gene_id=7173 | ||
| Line 18: | Line 21: | ||
|hgnc_mgi_id=HGNC:12015 | |hgnc_mgi_id=HGNC:12015 | ||
|nearest_ensembl=ENSG00000115705 | |nearest_ensembl=ENSG00000115705 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_175722 |
|nearest_refseq=NM_000547 | |nearest_refseq=NM_000547 | ||
|nearest_unigene=Hs.467554 | |nearest_unigene=Hs.467554 | ||
| − | |num_trans= | + | |num_trans=7173 |
|species=human | |species=human | ||
|start=1496422 | |start=1496422 | ||
| + | |start_of_center_position=1496428 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AY136822 | |transcript_name=AY136822 | ||
Latest revision as of 00:45, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1496428 |
|---|---|
| End of the center position in the TSS region: | 1496429 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AY136822 |
|---|---|
| Distance: | -378 |
| Num_trans: | 7173 |
| All_trans: | HGNC:12015 |
TATA-Box annotation
| Distance to TSS: | 82020 |
|---|---|
| Nearest PromoterID: | NM_175722 |
| Entrez ID: | 7173 |
| Nearest Unigene: | Hs.467554 |
| Nearest Refseq: | NM_000547 |
| Nearest Ensembl: | ENSG00000115705 |
| Gene Name: | thyroid peroxidase |
| Gene Alias: | MSA|TDH2A|TPX |
| Gene Description: | thyroid peroxidase |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
