Difference between revisions of "TSS:Hg 232131.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:3271 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=61 | |distance=61 | ||
|distance_to_tss=-8040 | |distance_to_tss=-8040 | ||
| − | |end= | + | |end=119080886 |
|end_of_center_position=119080885 | |end_of_center_position=119080885 | ||
|entrez_id=641451 | |entrez_id=641451 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_002917 | |nearest_refseq=NR_002917 | ||
|nearest_unigene=Hs.688653 | |nearest_unigene=Hs.688653 | ||
| − | |num_trans= | + | |num_trans=8661 |
|species=human | |species=human | ||
| − | |start= | + | |start=119080883 |
|start_of_center_position=119080884 | |start_of_center_position=119080884 | ||
| − | |strand= | + | |strand=- |
| − | |transcript_name= | + | |transcript_name=JX312508 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_232131.1 | |tss_id=hg_232131.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=J9R021 | |uniprot_id=J9R021 | ||
}} | }} | ||
Latest revision as of 11:04, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 119080884 |
|---|---|
| End of the center position in the TSS region: | 119080885 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | JX312508 |
|---|---|
| Distance: | 61 |
| Num_trans: | 8661 |
| All_trans: | HGNC:3271 |
TATA-Box annotation
| Distance to TSS: | -8040 |
|---|---|
| Nearest PromoterID: | NR_002917 |
| Entrez ID: | 641451 |
| Nearest Unigene: | Hs.688653 |
| Nearest Refseq: | NR_002917 |
| Nearest Ensembl: | ENSG00000207468 |
| Gene Name: | eukaryotic translation initiation factor 3 subunit A |
| Gene Alias: | ACA19 |
| Gene Description: | small nucleolar RNA, H/ACA box 19 |
| Gene Type: | snoRNA |
| CpG%: | 0.025 |
| GC%: | 0.38806 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
