Difference between revisions of "TSS:Hg 232135.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:9992 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
|distance=-51 | |distance=-51 | ||
|distance_to_tss=18 | |distance_to_tss=18 | ||
| − | |end= | + | |end=119527373 |
|end_of_center_position=119527373 | |end_of_center_position=119527373 | ||
|entrez_id=2869 | |entrez_id=2869 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_005308 | |nearest_refseq=NM_005308 | ||
|nearest_unigene=Hs.524625 | |nearest_unigene=Hs.524625 | ||
| − | |num_trans= | + | |num_trans=6001 |
|species=human | |species=human | ||
| − | |start= | + | |start=119527372 |
|start_of_center_position=119527372 | |start_of_center_position=119527372 | ||
| − | |strand= | + | |strand=- |
|tata_box=-7(AGGCATTAAAGC,-,0.00) | |tata_box=-7(AGGCATTAAAGC,-,0.00) | ||
|transcript_name=AF493934 CR457008 | |transcript_name=AF493934 CR457008 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_232135.1 | |tss_id=hg_232135.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 11:04, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 119527372 |
|---|---|
| End of the center position in the TSS region: | 119527373 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AF493934 CR457008 |
|---|---|
| Distance: | -51 |
| Num_trans: | 6001 |
| All_trans: | HGNC:9992 |
TATA-Box annotation
| Distance to TSS: | 18 |
|---|---|
| Nearest PromoterID: | NM_005308 |
| Entrez ID: | 2869 |
| Nearest Unigene: | Hs.524625 |
| Nearest Refseq: | NM_005308 |
| Nearest Ensembl: | ENSG00000198873 |
| Gene Name: | regulator of G protein signaling 10 |
| Gene Alias: | FP2025|GPRK5 |
| Gene Description: | G protein-coupled receptor kinase 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -7(AGGCATTAAAGC,-,0.00) |
