Difference between revisions of "TSS:Hg 232187.1"
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{{TSSDetail | {{TSSDetail | ||
|SHO= | |SHO= | ||
| − | |all_trans= | + | |all_trans=HGNC:28852 |
|bA108K14.1= | |bA108K14.1= | ||
|chr=chr10 | |chr=chr10 | ||
| Line 7: | Line 7: | ||
|distance=48 | |distance=48 | ||
|distance_to_tss=-8 | |distance_to_tss=-8 | ||
| − | |end= | + | |end=133569420 |
|end_of_center_position=133569420 | |end_of_center_position=133569420 | ||
|entrez_id=503542 | |entrez_id=503542 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_001012508 | |nearest_refseq=NM_001012508 | ||
|nearest_unigene=Hs.64968 | |nearest_unigene=Hs.64968 | ||
| − | |num_trans= | + | |num_trans=93426 |
|species=human | |species=human | ||
| − | |start= | + | |start=133569419 |
|start_of_center_position=133569419 | |start_of_center_position=133569419 | ||
|strand=- | |strand=- | ||
Latest revision as of 11:05, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 133569419 |
|---|---|
| End of the center position in the TSS region: | 133569420 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AY027807 |
|---|---|
| Distance: | 48 |
| Num_trans: | 93426 |
| All_trans: | HGNC:28852 |
TATA-Box annotation
| Distance to TSS: | -8 |
|---|---|
| Nearest PromoterID: | NM_001012508 |
| Entrez ID: | 503542 |
| Nearest Unigene: | Hs.64968 |
| Nearest Refseq: | NM_001012508 |
| Nearest Ensembl: | ENSG00000203772 |
| Gene Name: | synaptonemal complex central element protein 1 |
| Gene Alias: | SHADOO|SHO|bA108K14.1 |
| Gene Description: | shadow of prion protein |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
