Difference between revisions of "TSS:Hg 232299.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:28572 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance=-32 | |distance=-32 | ||
|distance_to_tss=13082 | |distance_to_tss=13082 | ||
| − | |end= | + | |end=48175111 |
|end_of_center_position=48175111 | |end_of_center_position=48175111 | ||
|entrez_id=100133093 | |entrez_id=100133093 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001137549 | |nearest_refseq=NM_001137549 | ||
|nearest_unigene=Hs.723078 | |nearest_unigene=Hs.723078 | ||
| − | |num_trans= | + | |num_trans=143162 |
|species=human | |species=human | ||
| − | |start= | + | |start=48175110 |
|start_of_center_position=48175110 | |start_of_center_position=48175110 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000491130.5 | + | |transcript_name=ENST00000491130.5 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232299.1 | |tss_id=hg_232299.1 | ||
Latest revision as of 11:07, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 48175110 |
|---|---|
| End of the center position in the TSS region: | 48175111 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000491130.5 |
|---|---|
| Distance: | -32 |
| Num_trans: | 143162 |
| All_trans: | HGNC:28572 |
TATA-Box annotation
| Distance to TSS: | 13082 |
|---|---|
| Nearest PromoterID: | NM_001137549 |
| Entrez ID: | 100133093 |
| Nearest Unigene: | Hs.723078 |
| Nearest Refseq: | NM_001137549 |
| Nearest Ensembl: | ENSG00000189090 |
| Gene Name: | FERM and PDZ domain containing 2 |
| Gene Alias: | FAM25A|FAM25B|FAM25C|bA301J7.4 |
| Gene Description: | family with sequence similarity 25 member G |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
