Difference between revisions of "TSS:Hg 232443.1"
From referenceTSS
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| Line 10: | Line 10: | ||
|PDLIM6= | |PDLIM6= | ||
|ZASP= | |ZASP= | ||
| − | |all_trans= | + | |all_trans=HGNC:21773 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss=11542 | |distance_to_tss=11542 | ||
| − | |end= | + | |end=88586762 |
|end_of_center_position=88586762 | |end_of_center_position=88586762 | ||
|entrez_id=11155 | |entrez_id=11155 | ||
| Line 32: | Line 32: | ||
|nearest_refseq=NM_007078 | |nearest_refseq=NM_007078 | ||
|nearest_unigene=Hs.657271 | |nearest_unigene=Hs.657271 | ||
| − | |num_trans= | + | |num_trans=142910 |
|species=human | |species=human | ||
| − | |start= | + | |start=88586761 |
|start_of_center_position=88586761 | |start_of_center_position=88586761 | ||
| − | |strand= | + | |strand=+ |
| − | |transcript_name=ENST00000371939.7 | + | |transcript_name=ENST00000371939.7 BC031219 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232443.1 | |tss_id=hg_232443.1 | ||
Latest revision as of 11:10, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 88586761 |
|---|---|
| End of the center position in the TSS region: | 88586762 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000371939.7 BC031219 |
|---|---|
| Distance: | 0 |
| Num_trans: | 142910 |
| All_trans: | HGNC:21773 |
TATA-Box annotation
| Distance to TSS: | 11542 |
|---|---|
| Nearest PromoterID: | NM_001080116 |
| Entrez ID: | 11155 |
| Nearest Unigene: | Hs.657271 |
| Nearest Refseq: | NM_007078 |
| Nearest Ensembl: | ENSG00000122367 |
| Gene Name: | lipase family member J |
| Gene Alias: | CMD1C|CMH24|CMPD3|CYPHER|LDB3Z1|LDB3Z4|LVNC3|MFM4|ORACLE|PDLIM6|ZASP |
| Gene Description: | LIM domain binding 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
