Difference between revisions of "TSS:Hg 232848.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|HIP3RP= | |HIP3RP= | ||
| − | |all_trans= | + | |all_trans=HGNC:4713 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=236 | |distance=236 | ||
|distance_to_tss=18389 | |distance_to_tss=18389 | ||
| − | |end= | + | |end=2001714 |
|end_of_center_position=2001710 | |end_of_center_position=2001710 | ||
|entrez_id=54503 | |entrez_id=54503 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_019028 | |nearest_refseq=NM_019028 | ||
|nearest_unigene=Hs.188569 | |nearest_unigene=Hs.188569 | ||
| − | |num_trans= | + | |num_trans=283120 |
|species=human | |species=human | ||
| − | |start= | + | |start=2001705 |
|start_of_center_position=2001709 | |start_of_center_position=2001709 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000428066.6 | |transcript_name=ENST00000428066.6 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_232848.1 | |tss_id=hg_232848.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 11:19, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 2001709 |
|---|---|
| End of the center position in the TSS region: | 2001710 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000428066.6 |
|---|---|
| Distance: | 236 |
| Num_trans: | 283120 |
| All_trans: | HGNC:4713 |
TATA-Box annotation
| Distance to TSS: | 18389 |
|---|---|
| Nearest PromoterID: | NM_019028 |
| Entrez ID: | 54503 |
| Nearest Unigene: | Hs.188569 |
| Nearest Refseq: | NM_019028 |
| Nearest Ensembl: | ENSG00000177054 |
| Gene Name: | H19 imprinted maternally expressed transcript |
| Gene Alias: | HIP14L|HIP3RP |
| Gene Description: | zinc finger DHHC-type containing 13 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
